RNA–Protein interactions for RNA: ENST00000450364.3

SMARCD2-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 5

Gene SMARCD2, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-204ENST00000450364 TNKSO95271 1327 aa16.1■□□□□ 0.17
SMARCD2-204ENST00000450364 SYNRGQ9UMZ2 1314 aa16.1■□□□□ 0.17
SMARCD2-204ENST00000450364 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 POTEB2H3BUK9 544 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 CTAGE5O15320 804 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 MYCNP04198 464 aaPredicted RBP16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 RARBP10826 455 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 PNMA1Q8ND90 353 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 KLHDC9Q8NEP7 349 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 SENP2Q9HC62 589 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 CNPY2Q9Y2B0 182 aa16.09■□□□□ 0.17
SMARCD2-204ENST00000450364 KBTBD13C9JR72 458 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 BMP8BP34820 402 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 SLC35G1Q2M3R5 365 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 CCDC144BQ3MJ40 725 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 TRIM60Q495X7 471 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 SLC30A10Q6XR72 485 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 FAM184BQ9ULE4 1060 aa16.08■□□□□ 0.16
SMARCD2-204ENST00000450364 A0A1W2PQ45 241 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 A0A1W2PQY0 241 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 BAATQ14032 418 aaPredicted RBP16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 NSMFQ6X4W1 530 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 IQCA1Q86XH1 822 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 MORC4Q8TE76 937 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 KRT23Q9C075 422 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 UPF3AQ9H1J1 476 aaKnown RBP16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 ABHD16BQ9H3Z7 469 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
SMARCD2-204ENST00000450364 DUSP11O75319 330 aaKnown RBP16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 NT5C2P49902 561 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 TAPT1Q6NXT6 567 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 SH3RF1Q7Z6J0 888 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 STAG2Q8N3U4 1231 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 MAP4K1Q92918 833 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 KAT14Q9H8E8 782 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 ATP11BQ9Y2G3 1177 aa16.06■□□□□ 0.16
SMARCD2-204ENST00000450364 WDR19Q8NEZ3 1342 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 TRIM43BA6NCK2 446 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 E7EWF7 191 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 ACLYP53396 1101 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 ANTXR2P58335 489 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 NKX3-2P78367 333 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 MDM2Q00987 491 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 KCNA10Q16322 511 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 GPATCH4Q5T3I0 446 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 C1orf53Q5VUE5 145 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 RNF180Q86T96 592 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 FBXO16Q8IX29 292 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 ADGRF4Q8IZF3 695 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 TBC1D5Q92609 795 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 TRIM43Q96BQ3 446 aaPredicted RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 LRCH3Q96II8 777 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 LSG1Q9H089 658 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 CNNM2Q9H8M5 875 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 PDLIM7Q9NR12 457 aa16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 GNEQ9Y223 722 aaKnown RBP16.05■□□□□ 0.16
SMARCD2-204ENST00000450364 A0A1W2PPC1 479 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 SMPD1P17405 629 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 ITGB8P26012 769 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 CST5P28325 142 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 ALDH5A1P51649 535 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 GJA9P57773 515 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 CDC37Q16543 378 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 CCDC178Q5BJE1 867 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 EEPD1Q7L9B9 569 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 CHST3Q7LGC8 479 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 RUFY2Q8WXA3 655 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 JMJD4Q9H9V9 463 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 MAD2L2Q9UI95 211 aa16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 RBM8AQ9Y5S9 174 aaKnown RBP16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 U3KPZ7 1027 aaPredicted RBP16.04■□□□□ 0.16
SMARCD2-204ENST00000450364 COL6A3P12111 3177 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 ASB14A6NK59 587 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 PPP1R11O60927 126 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 RPS6P62753 249 aaKnown RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 TLE2Q04725 743 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 USH1GQ495M9 461 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 ASPRV1Q53RT3 343 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 IFIT1BQ5T764 474 aaKnown RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 MB21D2Q8IYB1 491 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 TSEN34Q9BSV6 310 aaKnown RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 GPHNQ9NQX3 736 aaPredicted RBP16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 COL20A1Q9P218 1284 aa16.03■□□□□ 0.16
SMARCD2-204ENST00000450364 MYH6P13533 1939 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 PTPDC1A2A3K4 754 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 OPLAHO14841 1288 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 ASGR1P07306 291 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 EDNRBP24530 442 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 CALML3P27482 149 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 BEX3Q00994 111 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 TNFAIP2Q03169 654 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 QRICH1Q2TAL8 776 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 CENPQQ7L2Z9 268 aaPredicted RBP16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 MTMR8Q96EF0 704 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 ESYT1Q9BSJ8 1104 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 UBAC1Q9BSL1 405 aa16.02■□□□□ 0.16
SMARCD2-204ENST00000450364 PALM3A6NDB9 673 aaPredicted RBP16.01■□□□□ 0.15
SMARCD2-204ENST00000450364 PARP1P09874 1014 aaKnown RBP16.01■□□□□ 0.15
SMARCD2-204ENST00000450364 C6orf222P0C671 652 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms