RNA–Protein interactions for RNA: ENST00000449911.2

SSU72P1-201, Transcript of SSU72 pseudogene 1, humanhuman

BASIC

Gene SSU72P1, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72P1-201ENST00000449911 PRR12Q9ULL5 1215 aa11.17□□□□□ -0.62
SSU72P1-201ENST00000449911 DHX16O60231 1041 aaKnown RBP11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 EIF5BO60841 1220 aaKnown RBP11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 HOXC6P09630 235 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 SNHG28P0DPA3 235 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 CCL5P13501 91 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 SLC16A2P36021 539 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 NECTIN1Q15223 517 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 TKFCQ3LXA3 575 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 ADGRD1Q6QNK2 874 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 BTNL9Q6UXG8 535 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 STOX1Q6ZVD7 989 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 RASGRP2Q7LDG7 609 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 CATIPQ7Z7H3 387 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 ANKRD35Q8N283 1001 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 CHST13Q8NET6 341 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 TRIB2Q92519 343 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 USP6NLQ92738 828 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 DDX11Q96FC9 970 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 MTA3Q9BTC8 594 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 ACAD9Q9H845 621 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 CCPG1Q9ULG6 757 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 PLXNB2O15031 1838 aa11.16□□□□□ -0.62
SSU72P1-201ENST00000449911 COL11A1P12107 1806 aaPredicted RBP11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 PRC1O43663 620 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 ICAM1P05362 532 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 CAPN2P17655 700 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 MTFR1Q15390 333 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 SEC23AQ15436 765 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 TTBK2Q6IQ55 1244 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 NFXL1Q6ZNB6 911 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 CHST3Q7LGC8 479 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 MB21D2Q8IYB1 491 aaPredicted RBP11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 TMEM87BQ96K49 555 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 UNC93B1Q9H1C4 597 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 RANBP17Q9H2T7 1088 aaKnown RBP11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 HMX1Q9NP08 348 aaPredicted RBP11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 HOMER2Q9NSB8 354 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 RNF146Q9NTX7 359 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 TAF6LQ9Y6J9 622 aa11.15□□□□□ -0.62
SSU72P1-201ENST00000449911 PFASO15067 1338 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 RPTORQ8N122 1335 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 RBBP6Q7Z6E9 1792 aaKnown RBP11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 CCDC69A6NI79 296 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 GJB1P08034 283 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 HMGB1P09429 215 aaKnown RBP11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 GOLGA8HP0CJ92 632 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 ALAS1P13196 640 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 MLLT1Q03111 559 aaPredicted RBP11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 OLFML2BQ68BL8 750 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 TMTC2Q8N394 836 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 AGBL1Q96MI9 1066 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 TRERF1Q96PN7 1200 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 NEK1Q96PY6 1258 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 DIS3Q9Y2L1 958 aaKnown RBP11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 RIPK3Q9Y572 518 aa11.14□□□□□ -0.63
SSU72P1-201ENST00000449911 TK2O00142 265 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 EPB41L2O43491 1005 aaKnown RBP11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 DDAH1O94760 285 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 PGK2P07205 417 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 KIF5BP33176 963 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 RGS19P49795 217 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 SNAP25P60880 206 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 FGD1P98174 961 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 CCL14Q16627 93 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 SYNE3Q6ZMZ3 975 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 CTCFLQ8NI51 663 aaPredicted RBP11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 NPLOC4Q8TAT6 608 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 NUP133Q8WUM0 1156 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 DEFB118Q96PH6 123 aa11.13□□□□□ -0.63
SSU72P1-201ENST00000449911 ZNF536O15090 1300 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 WDR19Q8NEZ3 1342 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 COBLO75128 1261 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 TFRCP02786 760 aaKnown RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CALM1P0DP23 149 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CALM2P0DP24 149 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CALM3P0DP25 149 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 EN2P19622 333 aaPredicted RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CNGA1P29973 690 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 HSPA4P34932 840 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 LIFRP42702 1097 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 GJA8P48165 433 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 PSEN2P49810 448 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 ANTXR2P58335 489 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CACNB2Q08289 660 aaPredicted RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 TRIM32Q13049 653 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 TRAF1Q13077 416 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 GRM4Q14833 912 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 CDC37Q16543 378 aaPredicted RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 TSGA10IPQ3SY00 556 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 ZNF654Q8IZM8 581 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 MSL3Q8N5Y2 521 aaKnown RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 IGDCC4Q8TDY8 1250 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 U2AF1L4Q8WU68 220 aaKnown RBP11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 MAML3Q96JK9 1138 aa11.12□□□□□ -0.63
SSU72P1-201ENST00000449911 UBA5Q9GZZ9 404 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms