RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 HTATIP2Q9BUP3 242 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 ZHX1Q9UKY1 873 aaPredicted RBP13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 CNPY2Q9Y2B0 182 aa13.92□□□□□ -0.18
LSP1P3-201ENST00000449530 MCM5P33992 734 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 SLC30A10Q6XR72 485 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 ARMCX2Q7L311 632 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 NECAB2Q7Z6G3 386 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 CATIPQ7Z7H3 387 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 ZNF467Q7Z7K2 595 aaPredicted RBP13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 MSL3Q8N5Y2 521 aaKnown RBP13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 FAM133AQ8N9E0 248 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 LENG1Q96BZ8 264 aaPredicted RBP13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 LY9Q9HBG7 655 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 VAT1LQ9HCJ6 419 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 CYP39A1Q9NYL5 469 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 RBM27Q9P2N5 1060 aaKnown RBP13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 NRBP1Q9UHY1 535 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 MAD2L2Q9UI95 211 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 PNMA2Q9UL42 364 aa13.91□□□□□ -0.18
LSP1P3-201ENST00000449530 PTPDC1A2A3K4 754 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 SOWAHBA6NEL2 793 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 KLRF2D3W0D1 207 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 SH2B2O14492 632 aaPredicted RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 SNAI1O95863 264 aaPredicted RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 ZNF865P0CJ78 1059 aaPredicted RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 QRICH1Q2TAL8 776 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 MAMDC4Q6UXC1 1216 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 NFXL1Q6ZNB6 911 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 CCDC144CPQ8IYA2 1237 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 ZNF654Q8IZM8 581 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 IGDCC4Q8TDY8 1250 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 NUP133Q8WUM0 1156 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 CLEC4DQ8WXI8 215 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 DPF3Q92784 378 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 PURBQ96QR8 312 aaKnown RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 MYL10Q9BUA6 226 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 LRRC2Q9BYS8 371 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 C11orf49Q9H6J7 331 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 JMJD4Q9H9V9 463 aa13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 DDX49Q9Y6V7 483 aaKnown RBP13.9□□□□□ -0.18
LSP1P3-201ENST00000449530 ASTN1O14525 1302 aa13.9□□□□□ -0.19
LSP1P3-201ENST00000449530 PALM3A6NDB9 673 aaPredicted RBP13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 DDAH1O94760 285 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 AKR1A1P14550 325 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 CALML3P27482 149 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 TROAPQ12815 778 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 BAATQ14032 418 aaPredicted RBP13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 RNF207Q6ZRF8 634 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 RASEFQ8IZ41 740 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 TMEM87BQ96K49 555 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 BAZ2BQ9UIF8 2168 aaKnown RBP13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 ABCB11O95342 1321 aa13.89□□□□□ -0.19
LSP1P3-201ENST00000449530 CCDC69A6NI79 296 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 RARBP10826 455 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 ADCK5Q3MIX3 580 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 GJC2Q5T442 439 aaPredicted RBP13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 FBXO11Q86XK2 927 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 HOMER1Q86YM7 354 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 TCEANC2Q96MN5 208 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 XPNPEP3Q9NQH7 507 aa13.88□□□□□ -0.19
LSP1P3-201ENST00000449530 CUL9Q8IWT3 2517 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ASB14A6NK59 587 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 KBTBD13C9JR72 458 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 DNM1LO00429 736 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 REC8O95072 547 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 COL6A1P12109 1028 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 RXRAP19793 462 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ALDH5A1P51649 535 aaPredicted RBP13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 RPS6P62753 249 aaKnown RBP13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ACVR2BQ13705 512 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 RAB11FIP4Q86YS3 637 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 CTCFLQ8NI51 663 aaPredicted RBP13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ABHD16BQ9H3Z7 469 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ADD3Q9UEY8 706 aaKnown RBP13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 SYNRGQ9UMZ2 1314 aa13.87□□□□□ -0.19
LSP1P3-201ENST00000449530 ZBTB5O15062 677 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 ADCY6O43306 1168 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 EVI5O60447 810 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 PPP1R11O60927 126 aaPredicted RBP13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 PGK1P00558 417 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 KRT32Q14532 448 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 LRRC41Q15345 812 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 CCDC144BQ3MJ40 725 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 EEPD1Q7L9B9 569 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 FBXO16Q8IX29 292 aaPredicted RBP13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 C7orf61Q8IZ16 206 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 ARRDC4Q8NCT1 418 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 PIBF1Q8WXW3 757 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 MTMR8Q96EF0 704 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 PIGSQ96S52 555 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 AMNQ9BXJ7 453 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 KATNBL1Q9H079 304 aa13.86□□□□□ -0.19
LSP1P3-201ENST00000449530 FAM184BQ9ULE4 1060 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms