RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 TOB1P50616 345 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 FOXO4P98177 505 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 RASGRF1Q13972 1273 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 PDIA6Q15084 440 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 ZKSCAN8Q15776 578 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 PEX26Q7Z412 305 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 TBC1D1Q86TI0 1168 aaPredicted RBP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 BLIDQ8IZY5 108 aa13.71□□□□□ -0.21
UBE3B-204ENST00000449510 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.71□□□□□ -0.21
UBE3B-204ENST00000449510 ZSCAN5CA6NGD5 496 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-204ENST00000449510 NBPF26B4DH59 902 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 H7C1W4 665 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 SCG2P13521 617 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 GNAT2P19087 354 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 PICALMQ13492 652 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 ZNF658Q5TYW1 1059 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-204ENST00000449510 NBPF10Q6P3W6 841 aaKnown RBP13.71□□□□□ -0.22
UBE3B-204ENST00000449510 CCNI2Q6ZMN8 369 aaPredicted RBP13.71□□□□□ -0.22
UBE3B-204ENST00000449510 NBPF15Q8N660 670 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC155Q8N6L0 562 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 SNX29Q8TEQ0 813 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 CEP83Q9Y592 693 aa13.71□□□□□ -0.22
UBE3B-204ENST00000449510 CYP27B1O15528 508 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 TMOD1P28289 359 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 SFMBT2Q5VUG0 894 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 GPCPD1Q9NPB8 672 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 RWDD2AQ9UIY3 292 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 TULP2O00295 520 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 CTNND1O60716 968 aaKnown RBP13.7□□□□□ -0.22
UBE3B-204ENST00000449510 CARSP49589 748 aaKnown RBP13.7□□□□□ -0.22
UBE3B-204ENST00000449510 SNCBQ16143 134 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 GKAP1Q5VSY0 366 aaPredicted RBP13.7□□□□□ -0.22
UBE3B-204ENST00000449510 DNAAF5Q86Y56 855 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 ZCCHC11Q5TAX3 1644 aaKnown RBP13.7□□□□□ -0.22
UBE3B-204ENST00000449510 FCER1AP12319 257 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 DDX42Q86XP3 938 aaKnown RBP eCLIP13.7□□□□□ -0.22
UBE3B-204ENST00000449510 PLAAQ9Y263 795 aa13.7□□□□□ -0.22
UBE3B-204ENST00000449510 A0A1W2PRG0 241 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 FANCGO15287 622 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 UBE3CQ15386 1083 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC152Q4G0S7 254 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 GRIPAP1Q4V328 841 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 IGDCC4Q8TDY8 1250 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 HLFQ16534 295 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 CNNM4Q6P4Q7 775 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 FAM133AQ8N9E0 248 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 TTLL11Q8NHH1 800 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.69□□□□□ -0.22
UBE3B-204ENST00000449510 DNAJC17Q9NVM6 304 aaKnown RBP13.69□□□□□ -0.22
UBE3B-204ENST00000449510 HPSEQ9Y251 543 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 ALKQ9UM73 1620 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 REREQ9P2R6 1566 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 ACTN4O43707 911 aaKnown RBP13.69□□□□□ -0.22
UBE3B-204ENST00000449510 CALM1P0DP23 149 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 CALM2P0DP24 149 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 CALM3P0DP25 149 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 MYBL2P10244 700 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 ZBED6P86452 979 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 RPGRQ92834 1020 aaKnown RBP13.69□□□□□ -0.22
UBE3B-204ENST00000449510 OSBPL9Q96SU4 736 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 PSD3Q9NYI0 1048 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 PCDHB13Q9Y5F0 798 aa13.69□□□□□ -0.22
UBE3B-204ENST00000449510 PPRC1Q5VV67 1664 aaKnown RBP13.69□□□□□ -0.22
UBE3B-204ENST00000449510 INO80Q9ULG1 1556 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 RNF225M0QZC1 329 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 CTSWP56202 376 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC6Q16204 474 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 RUFY4Q6ZNE9 571 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 MAEAQ7L5Y9 396 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 CCDC84Q86UT8 332 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 LRRC45Q96CN5 670 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 ERBB3P21860 1342 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 SMIM22K7EJ46 135 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 PLCG1P19174 1290 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 PCK1P35558 622 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 LIFRP42702 1097 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 DHX9Q08211 1270 aaKnown RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 NEDD9Q14511 834 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 ASIC2Q16515 512 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 P2RX5Q93086 422 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 SETBP1Q9Y6X0 1596 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 SKAP2O75563 359 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 PALMO75781 387 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 RBM5P52756 815 aaKnown RBP eCLIP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 ARHGAP44Q17R89 818 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 OTUD6AQ7L8S5 288 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 U2AF1L4Q8WU68 220 aaKnown RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 DDX47Q9H0S4 455 aaKnown RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 C6orf50Q9HD87 102 aa13.68□□□□□ -0.22
UBE3B-204ENST00000449510 RBM28Q9NW13 759 aaKnown RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 UTP11Q9Y3A2 253 aaKnown RBP13.68□□□□□ -0.22
UBE3B-204ENST00000449510 EARS2Q5JPH6 523 aaKnown RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 FBF1Q8TES7 1133 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 MAP3K14Q99558 947 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 RNF26Q9BY78 433 aaPredicted RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 RBM12Q9NTZ6 932 aaKnown RBP13.67□□□□□ -0.22
UBE3B-204ENST00000449510 LRRC53A6NM62 1247 aa13.67□□□□□ -0.22
UBE3B-204ENST00000449510 LGALS16A8MUM7 142 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms