RNA–Protein interactions for RNA: ENST00000447641.5

SREBF1-207, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 644 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-207ENST00000447641 TRIM32Q13049 653 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 CHST13Q8NET6 341 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.46■□□□□ 0.23
SREBF1-207ENST00000447641 RIOX1Q9H6W3 641 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 JMJD4Q9H9V9 463 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 PNMA2Q9UL42 364 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 BRPF3Q9ULD4 1205 aa16.46■□□□□ 0.23
SREBF1-207ENST00000447641 CTDP1Q9Y5B0 961 aaPredicted RBP16.46■□□□□ 0.23
SREBF1-207ENST00000447641 BAZ2BQ9UIF8 2168 aaKnown RBP16.45■□□□□ 0.22
SREBF1-207ENST00000447641 DNAJC25-GNG10A0A024R161 153 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CCDC69A6NI79 296 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CALM1P0DP23 149 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CALM2P0DP24 149 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CALM3P0DP25 149 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
SREBF1-207ENST00000447641 SMARCA1P28370 1054 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 WDR78Q5VTH9 848 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CCDC174Q6PII3 467 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 APOA5Q6Q788 366 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 NFXL1Q6ZNB6 911 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 RUFY3Q7L099 469 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 TRMT44Q8IYL2 757 aaKnown RBP16.45■□□□□ 0.22
SREBF1-207ENST00000447641 APBA2Q99767 749 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 FBXO40Q9UH90 709 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 MYH6P13533 1939 aa16.45■□□□□ 0.22
SREBF1-207ENST00000447641 CYTH3O43739 400 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 CYP2B6P20813 491 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 EVCP57679 992 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 Q7L0L9 218 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 C7orf61Q8IZ16 206 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 NPLOC4Q8TAT6 608 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 MMP19Q99542 508 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 MYL10Q9BUA6 226 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 CWC22Q9HCG8 908 aaKnown RBP16.44■□□□□ 0.22
SREBF1-207ENST00000447641 ZMYND8Q9ULU4 1186 aaPredicted RBP16.44■□□□□ 0.22
SREBF1-207ENST00000447641 SLC12A7Q9Y666 1083 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 PLXNA1Q9UIW2 1896 aa16.44■□□□□ 0.22
SREBF1-207ENST00000447641 KIF5BP33176 963 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 BMP8BP34820 402 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 ANP32AP39687 249 aaKnown RBP16.43■□□□□ 0.22
SREBF1-207ENST00000447641 RCAN1P53805 252 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 ZNF792Q3KQV3 632 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 Q6ZUG5 572 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 NUP133Q8WUM0 1156 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 CLEC4DQ8WXI8 215 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 TRIB2Q92519 343 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 TRERF1Q96PN7 1200 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 SPZ1Q9BXG8 430 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 RNF146Q9NTX7 359 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 CCPG1Q9ULG6 757 aa16.43■□□□□ 0.22
SREBF1-207ENST00000447641 DIS3Q9Y2L1 958 aaKnown RBP16.43■□□□□ 0.22
SREBF1-207ENST00000447641 ALAS1P13196 640 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 GNAQP50148 359 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 KCTD2Q14681 263 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 CDC37Q16543 378 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-207ENST00000447641 CCL14Q16627 93 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 QRICH1Q2TAL8 776 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 MUM1L1Q5H9M0 696 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 MAP3K21Q5TCX8 1036 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 OLFML2BQ68BL8 750 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 CTCFLQ8NI51 663 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-207ENST00000447641 LZTS2Q9BRK4 669 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 ALDH8A1Q9H2A2 487 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-207ENST00000447641 ACAD9Q9H845 621 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
SREBF1-207ENST00000447641 FLRT1Q9NZU1 646 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 CYP46A1Q9Y6A2 500 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 LTBP2Q14767 1821 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 PFASO15067 1338 aa16.42■□□□□ 0.22
SREBF1-207ENST00000447641 MUC3AQ02505 3323 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 ZBTB5O15062 677 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 PPP1R11O60927 126 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-207ENST00000447641 HMGCRP04035 888 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 PGK2P07205 417 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 SYN1P17600 705 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 SLC4A3P48751 1232 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 TOB2Q14106 344 aaPredicted RBP16.41■□□□□ 0.22
SREBF1-207ENST00000447641 NECAB2Q7Z6G3 386 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 SRBD1Q8N5C6 995 aaKnown RBP16.41■□□□□ 0.22
SREBF1-207ENST00000447641 RGS22Q8NE09 1264 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 BRF1Q92994 677 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 MAF1Q9H063 256 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 VAT1LQ9HCJ6 419 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 A1CFQ9NQ94 594 aaKnown RBP16.41■□□□□ 0.22
SREBF1-207ENST00000447641 HOMER2Q9NSB8 354 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 SLC5A4Q9NY91 659 aa16.41■□□□□ 0.22
SREBF1-207ENST00000447641 NID2Q14112 1375 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 KLF18A0A0U1RQI7 1052 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 ZBTB43O43298 467 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 TAL1P17542 331 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-207ENST00000447641 CAPN2P17655 700 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 RXRAP19793 462 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 MAGEA10P43363 369 aaPredicted RBP16.4■□□□□ 0.22
SREBF1-207ENST00000447641 APOBRQ0VD83 1088 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 FUT2Q10981 343 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 PPP2R5BQ15173 497 aa16.4■□□□□ 0.22
SREBF1-207ENST00000447641 SYNE3Q6ZMZ3 975 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms