RNA–Protein interactions for RNA: ENST00000447601.6

FAM3A-215, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM3A, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-215ENST00000447601 SFPQP23246 707 aaKnown RBP eCLIP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CCZ1BP86790 482 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CCZ1P86791 482 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 SEMA3FQ13275 785 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CABP7Q86V35 215 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 MED15Q96RN5 788 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 SYNPO2Q9UMS6 1093 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 PPP1R3GB7ZBB8 358 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 RPN1P04843 607 aaKnown RBP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CD44P16070 742 aaKnown RBP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CLK2P49760 499 aaKnown RBP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 SHROOM1Q2M3G4 852 aaPredicted RBP22.03■■□□□ 1.12
FAM3A-215ENST00000447601 NAALADL2Q58DX5 795 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 SIAH1Q8IUQ4 282 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 VSTM4Q8IW00 320 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 GMCL1Q96IK5 515 aa22.03■■□□□ 1.12
FAM3A-215ENST00000447601 CALCRLQ16602 461 aa22.02■■□□□ 1.12
FAM3A-215ENST00000447601 KLHL10Q6JEL2 608 aa22.02■■□□□ 1.12
FAM3A-215ENST00000447601 POTEDQ86YR6 584 aa22.02■■□□□ 1.12
FAM3A-215ENST00000447601 PSTPIP2Q9H939 334 aa22.02■■□□□ 1.12
FAM3A-215ENST00000447601 F5H6K3 240 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 GH2P01242 217 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 TNNI2P48788 182 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 KLRC3Q07444 240 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 QRICH1Q2TAL8 776 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 ZNF658Q5TYW1 1059 aaPredicted RBP22.01■■□□□ 1.11
FAM3A-215ENST00000447601 NIM1KQ8IY84 436 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 FAM151AQ8WW52 585 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 MTMR9Q96QG7 549 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 KBTBD4Q9NVX7 518 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 ZNF70Q9UC06 446 aaPredicted RBP22.01■■□□□ 1.11
FAM3A-215ENST00000447601 TCP10L2B9ZVM9 353 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 TMEM266Q2M3C6 531 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 PPP4R3AQ6IN85 833 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 ARMCX5Q6P1M9 558 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 IGSF22Q8N9C0 903 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 PRIMPOLQ96LW4 560 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 NAP1L4Q99733 375 aaKnown RBP22.01■■□□□ 1.11
FAM3A-215ENST00000447601 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.01■■□□□ 1.11
FAM3A-215ENST00000447601 SAMSN1Q9NSI8 373 aaKnown RBP22.01■■□□□ 1.11
FAM3A-215ENST00000447601 ZNRF3Q9ULT6 936 aa22.01■■□□□ 1.11
FAM3A-215ENST00000447601 TECP42680 631 aa22■■□□□ 1.11
FAM3A-215ENST00000447601 FXR2P51116 673 aaKnown RBP eCLIP22■■□□□ 1.11
FAM3A-215ENST00000447601 KCNB1Q14721 858 aa22■■□□□ 1.11
FAM3A-215ENST00000447601 CDC37Q16543 378 aaPredicted RBP22■■□□□ 1.11
FAM3A-215ENST00000447601 UBE2SQ16763 222 aa22■■□□□ 1.11
FAM3A-215ENST00000447601 SMYD4Q8IYR2 804 aaPredicted RBP22■■□□□ 1.11
FAM3A-215ENST00000447601 AGBL3Q8NEM8 1001 aa22■■□□□ 1.11
FAM3A-215ENST00000447601 RAB34Q9BZG1 259 aa22■■□□□ 1.11
FAM3A-215ENST00000447601 CLRN2A0PK11 232 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 NDUFB10O96000 172 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 GCFC2P16383 781 aaKnown RBP21.99■■□□□ 1.11
FAM3A-215ENST00000447601 PLCG1P19174 1290 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 SPDYE2Q495Y8 402 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 HSP90AA4PQ58FG1 418 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 INTS13Q9NVM9 706 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 RWDD2AQ9UIY3 292 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 PCDHA1Q9Y5I3 950 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 TDP2O95551 362 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 TXKP42681 527 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 STX17P56962 302 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 TGFB2P61812 414 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 FKBP1CQ5VVH2 108 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 CALML4Q96GE6 196 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 PIM2Q9P1W9 311 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 CTNND2Q9UQB3 1225 aa21.99■■□□□ 1.11
FAM3A-215ENST00000447601 PSME4Q14997 1843 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 MYH4Q9Y623 1939 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 TMEM232C9JQI7 657 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 SLC37A4O43826 429 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 PAK1Q13153 545 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 CDKAL1Q5VV42 579 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 MTMR14Q8NCE2 650 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 CTAGE1Q96RT6 745 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 KCND1Q9NSA2 647 aa21.98■■□□□ 1.11
FAM3A-215ENST00000447601 ZBTB12Q9Y330 459 aaPredicted RBP21.98■■□□□ 1.11
FAM3A-215ENST00000447601 COL4A5P29400 1685 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 KCNJ6P48051 423 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 TPD52L1Q16890 204 aaPredicted RBP21.97■■□□□ 1.11
FAM3A-215ENST00000447601 MCTP2Q6DN12 878 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 CCDC112Q8NEF3 446 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 PLIN2Q99541 437 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 LRWD1Q9UFC0 647 aa21.97■■□□□ 1.11
FAM3A-215ENST00000447601 ATF5Q9Y2D1 282 aaPredicted RBP21.97■■□□□ 1.11
FAM3A-215ENST00000447601 EDIL3O43854 480 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 BMP3P12645 472 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 JAG1P78504 1218 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 AMPD3Q01432 767 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 PDIA5Q14554 519 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 CCDC47Q96A33 483 aaKnown RBP21.96■■□□□ 1.11
FAM3A-215ENST00000447601 AMNQ9BXJ7 453 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 GTPBP4Q9BZE4 634 aaKnown RBP21.96■■□□□ 1.11
FAM3A-215ENST00000447601 ARHGEF10LQ9HCE6 1279 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 A0A1B0GTH6 734 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 IKQ13123 557 aaPredicted RBP21.96■■□□□ 1.11
FAM3A-215ENST00000447601 RRP1BQ14684 758 aaKnown RBP21.96■■□□□ 1.11
FAM3A-215ENST00000447601 SYDE2Q5VT97 1194 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 SPECC1LQ69YQ0 1117 aa21.96■■□□□ 1.11
FAM3A-215ENST00000447601 MMTAG2Q9BU76 263 aaKnown RBP21.96■■□□□ 1.11
FAM3A-215ENST00000447601 DDX25Q9UHL0 483 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms