RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 ABCB11O95342 1321 aa17.4■□□□□ 0.38
CCNE1-203ENST00000444983 M0R2N6 131 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 ADAMTS3O15072 1205 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 NAPAP54920 295 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 DAGLBQ8NCG7 672 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 CCDC148Q8NFR7 591 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 CCDC12Q8WUD4 166 aaPredicted RBP17.39■□□□□ 0.37
CCNE1-203ENST00000444983 CLEC4DQ8WXI8 215 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 SPATC1LQ9H0A9 340 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 PCNTO95613 3336 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 SMCO2A6NFE2 343 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 BRD1O95696 1058 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 GHRHRQ02643 423 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 SNRNP48Q6IEG0 339 aaKnown RBP17.39■□□□□ 0.37
CCNE1-203ENST00000444983 GALNT17Q6IS24 598 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 RIOX2Q8IUF8 465 aa17.39■□□□□ 0.37
CCNE1-203ENST00000444983 SMCR8Q8TEV9 937 aaPredicted RBP17.39■□□□□ 0.37
CCNE1-203ENST00000444983 FOSBP53539 338 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 GUCY1B3Q02153 619 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 TRIM29Q14134 588 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 TEX2Q8IWB9 1127 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 RIC8AQ9NPQ8 531 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 PCDHA4Q9UN74 947 aa17.38■□□□□ 0.37
CCNE1-203ENST00000444983 MRPL11Q9Y3B7 192 aaKnown RBP17.38■□□□□ 0.37
CCNE1-203ENST00000444983 CTDP1Q9Y5B0 961 aaPredicted RBP17.38■□□□□ 0.37
CCNE1-203ENST00000444983 H3BQV1 296 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 MEIS2O14770 477 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 TLR2O60603 784 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 ALDH1A1P00352 501 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 BCRP11274 1271 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 U2AF2P26368 475 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCNE1-203ENST00000444983 CALML3P27482 149 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 GNA11P29992 359 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 CLK2P49760 499 aaKnown RBP17.37■□□□□ 0.37
CCNE1-203ENST00000444983 ERVK-9P63128 1117 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 ERVK-24P63145 666 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 TAF1CQ15572 869 aaPredicted RBP17.37■□□□□ 0.37
CCNE1-203ENST00000444983 TKFCQ3LXA3 575 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 IFFO2Q5TF58 517 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.37■□□□□ 0.37
CCNE1-203ENST00000444983 TNFRSF25Q93038 417 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 CFHR5Q9BXR6 569 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 MOV10L1Q9BXT6 1211 aaKnown RBP17.37■□□□□ 0.37
CCNE1-203ENST00000444983 C6orf50Q9HD87 102 aa17.37■□□□□ 0.37
CCNE1-203ENST00000444983 BTBD18B2RXH4 712 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 PIK3CDO00329 1044 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 CA12O43570 354 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 ALAS1P13196 640 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 NLRP5P59047 1200 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 NUCB2P80303 420 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 FAM110CQ1W6H9 321 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 MUM1L1Q5H9M0 696 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 C17orf99Q6UX52 265 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 DIS3L2Q8IYB7 885 aaKnown RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 ANKRD13CQ8N6S4 541 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 GPRC5AQ8NFJ5 357 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 OXER1Q8TDS5 423 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 TRERF1Q96PN7 1200 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 PAGR1Q9BTK6 254 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 MAF1Q9H063 256 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 R3HDMLQ9H3Y0 253 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 PSTPIP2Q9H939 334 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 RBBP6Q7Z6E9 1792 aaKnown RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 VPS37CA5D8V6 355 aaPredicted RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 KIF28PB7ZC32 967 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 NFIBO00712 420 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 ZSCAN22P10073 491 aaPredicted RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 MRPL12P52815 198 aaKnown RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 CRHR2Q13324 411 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 PLS1Q14651 629 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 BLIDQ8IZY5 108 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 CHST13Q8NET6 341 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 TBC1D5Q92609 795 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 GLT8D2Q9H1C3 349 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 FOXP1Q9H334 677 aaPredicted RBP17.36■□□□□ 0.37
CCNE1-203ENST00000444983 RNF146Q9NTX7 359 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 CHMP5Q9NZZ3 219 aa17.36■□□□□ 0.37
CCNE1-203ENST00000444983 SLC25A27O95847 323 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 HSD17B4P51659 736 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 ADCY7P51828 1080 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 SAMD3Q8N6K7 520 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 SHCBP1Q8NEM2 672 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 CUL5Q93034 780 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 ZFYVE28Q9HCC9 887 aa17.35■□□□□ 0.37
CCNE1-203ENST00000444983 COPB2P35606 906 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 KRT2P35908 639 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 NR5A1Q13285 461 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 USP17L6PQ6QN14 398 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 BICD2Q8TD16 824 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 HOMER2Q9NSB8 354 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 MAP3K20Q9NYL2 800 aaKnown RBP17.34■□□□□ 0.37
CCNE1-203ENST00000444983 PCDHA6Q9UN73 950 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 PCDHA8Q9Y5H6 950 aa17.34■□□□□ 0.37
CCNE1-203ENST00000444983 F13A1P00488 732 aa17.33■□□□□ 0.37
CCNE1-203ENST00000444983 ERCC3P19447 782 aa17.33■□□□□ 0.37
CCNE1-203ENST00000444983 RESTQ13127 1097 aa17.33■□□□□ 0.37
CCNE1-203ENST00000444983 SAFBQ15424 915 aaKnown RBP eCLIP17.33■□□□□ 0.37
CCNE1-203ENST00000444983 MCF2L2Q86YR7 1114 aa17.33■□□□□ 0.37
CCNE1-203ENST00000444983 REXO1Q8N1G1 1221 aaKnown RBP17.33■□□□□ 0.37
CCNE1-203ENST00000444983 DNAJC5GQ8N7S2 189 aa17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms