RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 KCNA10Q16322 511 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 MUM1L1Q5H9M0 696 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 KLHDC9Q8NEP7 349 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 VTI1AQ96AJ9 217 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 ZSCAN10Q96SZ4 725 aaPredicted RBP22.05■■□□□ 1.12
CCDC78-204ENST00000439619 UBAC1Q9BSL1 405 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 PLXNA1Q9UIW2 1896 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 RAD50Q92878 1312 aa22.05■■□□□ 1.12
CCDC78-204ENST00000439619 ZNFX1Q9P2E3 1918 aaKnown RBP22.04■■□□□ 1.12
CCDC78-204ENST00000439619 SOWAHBA6NEL2 793 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 DCDC2CA8MYV0 355 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 SOX1O00570 391 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-204ENST00000439619 CLTBP09497 229 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 SNHG28P0DPA3 235 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 CST5P28325 142 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-204ENST00000439619 GJA9P57773 515 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 IRX6P78412 446 aaPredicted RBP22.04■■□□□ 1.12
CCDC78-204ENST00000439619 TNFAIP2Q03169 654 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 TRDNQ13061 729 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 GNASQ5JWF2 1037 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 PNMA1Q8ND90 353 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 LRCH3Q96II8 777 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 MROH7Q68CQ1 1323 aa22.04■■□□□ 1.12
CCDC78-204ENST00000439619 LOC102724159A0A0B4J2E5 919 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 PTPDC1A2A3K4 754 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 B4E1Z4 1266 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 PQBP1O60828 265 aaKnown RBP22.03■■□□□ 1.12
CCDC78-204ENST00000439619 PWP2Q15269 919 aaKnown RBP22.03■■□□□ 1.12
CCDC78-204ENST00000439619 TOX2Q96NM4 488 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 AP5M1Q9H0R1 490 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 PDLIM7Q9NR12 457 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 ELP1O95163 1332 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 WDR19Q8NEZ3 1342 aa22.03■■□□□ 1.12
CCDC78-204ENST00000439619 B4DLN1 442 aa22.02■■□□□ 1.12
CCDC78-204ENST00000439619 PDE4AP27815 886 aa22.02■■□□□ 1.12
CCDC78-204ENST00000439619 MRPL12P52815 198 aaKnown RBP22.02■■□□□ 1.12
CCDC78-204ENST00000439619 BAATQ14032 418 aaPredicted RBP22.02■■□□□ 1.12
CCDC78-204ENST00000439619 UPF3AQ9H1J1 476 aaKnown RBP22.02■■□□□ 1.12
CCDC78-204ENST00000439619 VTA1Q9NP79 307 aa22.02■■□□□ 1.12
CCDC78-204ENST00000439619 ZEB2O60315 1214 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 ASGR1P07306 291 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 ASPRV1Q53RT3 343 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 IQSEC1Q6DN90 963 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 RNF207Q6ZRF8 634 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 ANKRD33Q7Z3H0 272 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 ANKS1AQ92625 1134 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 BADQ92934 168 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 KATNBL1Q9H079 304 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 TMEM39AQ9NV64 488 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 ZSWIM5Q9P217 1185 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 TNKSO95271 1327 aa22.01■■□□□ 1.11
CCDC78-204ENST00000439619 NFIBO00712 420 aa22■■□□□ 1.11
CCDC78-204ENST00000439619 DHX16O60231 1041 aaKnown RBP22■■□□□ 1.11
CCDC78-204ENST00000439619 GOLGA8HP0CJ92 632 aa22■■□□□ 1.11
CCDC78-204ENST00000439619 GSPT1P15170 499 aaKnown RBP22■■□□□ 1.11
CCDC78-204ENST00000439619 RAG1P15918 1043 aa22■■□□□ 1.11
CCDC78-204ENST00000439619 CCSAPQ6IQ19 270 aaPredicted RBP22■■□□□ 1.11
CCDC78-204ENST00000439619 U3KPZ7 1027 aaPredicted RBP22■■□□□ 1.11
CCDC78-204ENST00000439619 A0A0U1RQG5 324 aaPredicted RBP21.99■■□□□ 1.11
CCDC78-204ENST00000439619 CABYRO75952 493 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 PARP1P09874 1014 aaKnown RBP21.99■■□□□ 1.11
CCDC78-204ENST00000439619 CALML3P27482 149 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 IFIT1BQ5T764 474 aaKnown RBP21.99■■□□□ 1.11
CCDC78-204ENST00000439619 EEPD1Q7L9B9 569 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 TLK2Q86UE8 772 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 ENAHQ8N8S7 591 aaPredicted RBP21.99■■□□□ 1.11
CCDC78-204ENST00000439619 MAF1Q9H063 256 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 Q9Y3F1 56 aa21.99■■□□□ 1.11
CCDC78-204ENST00000439619 TRIM43BA6NCK2 446 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 MYADML2A6NDP7 307 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 KIAA0355O15063 1070 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 TLR3O15455 904 aaKnown RBP21.98■■□□□ 1.11
CCDC78-204ENST00000439619 ADCY6O43306 1168 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 ALDH5A1P51649 535 aaPredicted RBP21.98■■□□□ 1.11
CCDC78-204ENST00000439619 NKX3-2P78367 333 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 KIAA1211Q6ZU35 1233 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 SH3RF1Q7Z6J0 888 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 FBXO16Q8IX29 292 aaPredicted RBP21.98■■□□□ 1.11
CCDC78-204ENST00000439619 MORC4Q8TE76 937 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 TRIM43Q96BQ3 446 aaPredicted RBP21.98■■□□□ 1.11
CCDC78-204ENST00000439619 UBA5Q9GZZ9 404 aa21.98■■□□□ 1.11
CCDC78-204ENST00000439619 ERICH2A1L162 156 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 DYNC1LI2O43237 492 aaPredicted RBP21.97■■□□□ 1.11
CCDC78-204ENST00000439619 CHMLP26374 656 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 PDE4DQ08499 809 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 FSCN1Q16658 493 aaKnown RBP21.97■■□□□ 1.11
CCDC78-204ENST00000439619 USH1GQ495M9 461 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 DEFB123Q8N688 67 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 DNERQ8NFT8 737 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 CLEC4DQ8WXI8 215 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 SEZ6LQ9BYH1 1024 aa21.97■■□□□ 1.11
CCDC78-204ENST00000439619 GNEQ9Y223 722 aaKnown RBP21.97■■□□□ 1.11
CCDC78-204ENST00000439619 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.96■■□□□ 1.11
CCDC78-204ENST00000439619 ARVCFO00192 962 aa21.96■■□□□ 1.11
CCDC78-204ENST00000439619 SMPD1P17405 629 aa21.96■■□□□ 1.11
CCDC78-204ENST00000439619 CDC37Q16543 378 aaPredicted RBP21.96■■□□□ 1.11
CCDC78-204ENST00000439619 RALYLQ86SE5 291 aaKnown RBP21.96■■□□□ 1.11
CCDC78-204ENST00000439619 MCF2L2Q86YR7 1114 aa21.96■■□□□ 1.11
CCDC78-204ENST00000439619 RGS22Q8NE09 1264 aa21.96■■□□□ 1.11
CCDC78-204ENST00000439619 ASTN1O14525 1302 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms