RNA–Protein interactions for RNA: ENST00000435539.1

AL441943.1-201, humanhuman

TSL 3 BASIC

Gene AL441943.1, Length 432 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL441943.1-201ENST00000435539 RUFY3Q7L099 469 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 KRT26Q7Z3Y9 468 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 TRPM4Q8TD43 1214 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 JAKMIP1Q96N16 626 aaKnown RBP9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 DDX4Q9NQI0 724 aaKnown RBP9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 TOMM22Q9NS69 142 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 SEPT3Q9UH03 358 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 SAP30BPQ9UHR5 308 aaKnown RBP9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 SYNPO2Q9UMS6 1093 aa9.74□□□□□ -0.85
AL441943.1-201ENST00000435539 POTECB2RU33 542 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 H3BRB1 525 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 CTNND1O60716 968 aaKnown RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 TSPY3P0CV98 308 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 TSPY8P0CW00 308 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 CASTP20810 708 aaKnown RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 ANP32AP39687 249 aaKnown RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 HAND2P61296 217 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 CENPCQ03188 943 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 BECN1Q14457 450 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 SYNE3Q6ZMZ3 975 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 GTF3C2Q8WUA4 911 aaPredicted RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 COL26A1Q96A83 441 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 UBAC1Q9BSL1 405 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 ZNF341Q9BYN7 854 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 TUT1Q9H6E5 874 aaKnown RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 BIN2Q9UBW5 565 aaPredicted RBP9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 EGFL7Q9UHF1 273 aa9.73□□□□□ -0.85
AL441943.1-201ENST00000435539 DDTLA6NHG4 134 aaPredicted RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 CDK2AP1O14519 115 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 CAPN5O15484 640 aaPredicted RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 RANBP6O60518 1105 aaKnown RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 UPP2O95045 317 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 EGFRP00533 1210 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 ASNSP08243 561 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 RPS6KB1P23443 525 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 LIFRP42702 1097 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 IREB2P48200 963 aaKnown RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 NEK4P51957 841 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 CACNB3P54284 484 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 CAPN12Q6ZSI9 719 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 TMEM179Q6ZVK1 233 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 USP48Q86UV5 1035 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 NEDD1Q8NHV4 660 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 ZSCAN31Q96LW9 406 aaPredicted RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 TSEN34Q9BSV6 310 aaKnown RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 TMEM39BQ9GZU3 492 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 SH2D4AQ9H788 454 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 KANSL2Q9H9L4 492 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 PDRG1Q9NUG6 133 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 PCDHAC2Q9Y5I4 1007 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 HRH3Q9Y5N1 445 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 USP3Q9Y6I4 520 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 ZNF646O15015 1829 aaPredicted RBP9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 CNTNAP1P78357 1384 aa9.72□□□□□ -0.85
AL441943.1-201ENST00000435539 MYO5AQ9Y4I1 1855 aaKnown RBP9.71□□□□□ -0.85
AL441943.1-201ENST00000435539 SHTN1A0MZ66 631 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 RGS20O76081 388 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 CALM1P0DP23 149 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 CALM2P0DP24 149 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 CALM3P0DP25 149 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 RCAN1P53805 252 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 TFAP4Q01664 338 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 NAA30Q147X3 362 aaPredicted RBP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 GLYCTKQ8IVS8 523 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 ANKS1AQ92625 1134 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 SNX21Q969T3 373 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 TEPSINQ96N21 525 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 ZSCAN10Q96SZ4 725 aaPredicted RBP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 AS3MTQ9HBK9 375 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 ZSWIM5Q9P217 1185 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 ZNF112Q9UJU3 913 aa9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.86
AL441943.1-201ENST00000435539 CCDC196A0A1B0GTZ2 297 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 FAM187AA6NFU0 413 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 B4E1Z4 1266 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 IFIT3O14879 490 aaKnown RBP9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 PRC1O43663 620 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 TTLL1O95922 423 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 CAP2P40123 477 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 EXOSC10Q01780 885 aaKnown RBP9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 FSTL1Q12841 308 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 WTAPQ15007 396 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 MAP3K11Q16584 847 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 ABCB5Q2M3G0 1257 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 IFIT1BQ5T764 474 aaKnown RBP9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 TMEM214Q6NUQ4 689 aaKnown RBP9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 TBC1D10CQ8IV04 446 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 ZFPM1Q8IX07 1006 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 MB21D2Q8IYB1 491 aaPredicted RBP9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 LINC00528Q8N1L1 170 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 STAG2Q8N3U4 1231 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 C2orf69Q8N8R5 385 aa9.7□□□□□ -0.86
AL441943.1-201ENST00000435539 SMC1BQ8NDV3 1235 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms