RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CNPY2Q9Y2B0 182 aa19.87■□□□□ 0.77
UBE3D-204ENST00000430071 RBM8AQ9Y5S9 174 aaKnown RBP19.87■□□□□ 0.77
UBE3D-204ENST00000430071 U3KPZ7 1027 aaPredicted RBP19.87■□□□□ 0.77
UBE3D-204ENST00000430071 ADAMTS4O75173 837 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 MDM2Q00987 491 aaPredicted RBP19.86■□□□□ 0.77
UBE3D-204ENST00000430071 ACVR2BQ13705 512 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 MSL3Q8N5Y2 521 aaKnown RBP19.86■□□□□ 0.77
UBE3D-204ENST00000430071 ENAHQ8N8S7 591 aaPredicted RBP19.86■□□□□ 0.77
UBE3D-204ENST00000430071 UBA5Q9GZZ9 404 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 CTNNA3Q9UI47 895 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 SYNRGQ9UMZ2 1314 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 ATP11BQ9Y2G3 1177 aa19.86■□□□□ 0.77
UBE3D-204ENST00000430071 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.85■□□□□ 0.77
UBE3D-204ENST00000430071 NFIBO00712 420 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 ICAM1P05362 532 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 IMMTQ16891 758 aaKnown RBP19.85■□□□□ 0.77
UBE3D-204ENST00000430071 TKFCQ3LXA3 575 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 CCDC144BQ3MJ40 725 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 TMEM63BQ5T3F8 832 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 NSMFQ6X4W1 530 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 CYP39A1Q9NYL5 469 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 PHF24Q9UPV7 400 aa19.85■□□□□ 0.77
UBE3D-204ENST00000430071 MYH7BA7E2Y1 1941 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 TRIM60Q495X7 471 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 SH3RF1Q7Z6J0 888 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 DGKHQ86XP1 1220 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 PNMA1Q8ND90 353 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 ANKS1AQ92625 1134 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 ZSCAN10Q96SZ4 725 aaPredicted RBP19.84■□□□□ 0.77
UBE3D-204ENST00000430071 FAM184BQ9ULE4 1060 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 KIAA1217Q5T5P2 1943 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 TNKSO95271 1327 aa19.84■□□□□ 0.77
UBE3D-204ENST00000430071 CYP21A2P08686 494 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 BMP8BP34820 402 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 BAATQ14032 418 aaPredicted RBP19.83■□□□□ 0.77
UBE3D-204ENST00000430071 SNX17Q15036 470 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 KLHDC9Q8NEP7 349 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 CLEC4DQ8WXI8 215 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 LRCH3Q96II8 777 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 ABHD16BQ9H3Z7 469 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 PDGFCQ9NRA1 345 aa19.83■□□□□ 0.77
UBE3D-204ENST00000430071 CCSAPQ6IQ19 270 aaPredicted RBP19.83■□□□□ 0.76
UBE3D-204ENST00000430071 EEPD1Q7L9B9 569 aa19.83■□□□□ 0.76
UBE3D-204ENST00000430071 SENP2Q9HC62 589 aa19.83■□□□□ 0.76
UBE3D-204ENST00000430071 A0A1W2PQ45 241 aaPredicted RBP19.82■□□□□ 0.76
UBE3D-204ENST00000430071 A0A1W2PQY0 241 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 CTAGE5O15320 804 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 DUSP11O75319 330 aaKnown RBP19.82■□□□□ 0.76
UBE3D-204ENST00000430071 NECTIN1Q15223 517 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 SEC23AQ15436 765 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 KCNA10Q16322 511 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 SLC30A10Q6XR72 485 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 RNF180Q86T96 592 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 IQCA1Q86XH1 822 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 TBC1D5Q92609 795 aa19.82■□□□□ 0.76
UBE3D-204ENST00000430071 SLC27A2O14975 620 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 REC8O95072 547 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 TLE2Q04725 743 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 COL9A3Q14050 684 aaPredicted RBP19.81■□□□□ 0.76
UBE3D-204ENST00000430071 C8orf34Q49A92 452 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 STAG2Q8N3U4 1231 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 KRT23Q9C075 422 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 KAT14Q9H8E8 782 aa19.81■□□□□ 0.76
UBE3D-204ENST00000430071 TRIM43BA6NCK2 446 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 C6orf222P0C671 652 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-204ENST00000430071 ACLYP53396 1101 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 BEX3Q00994 111 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 USH1GQ495M9 461 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 CREB3L3Q68CJ9 461 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 TAPT1Q6NXT6 567 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 FBXO16Q8IX29 292 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-204ENST00000430071 ADGRF4Q8IZF3 695 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 TRIM43Q96BQ3 446 aaPredicted RBP19.8■□□□□ 0.76
UBE3D-204ENST00000430071 UBE2OQ9C0C9 1292 aaKnown RBP19.8■□□□□ 0.76
UBE3D-204ENST00000430071 PDLIM7Q9NR12 457 aa19.8■□□□□ 0.76
UBE3D-204ENST00000430071 PTPDC1A2A3K4 754 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 SEC24BO95487 1268 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 ITGB8P26012 769 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 SLC35G1Q2M3R5 365 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 GPATCH4Q5T3I0 446 aaKnown RBP19.79■□□□□ 0.76
UBE3D-204ENST00000430071 CHST3Q7LGC8 479 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 UPF3AQ9H1J1 476 aaKnown RBP19.79■□□□□ 0.76
UBE3D-204ENST00000430071 VAT1LQ9HCJ6 419 aa19.79■□□□□ 0.76
UBE3D-204ENST00000430071 PRDM5Q9NQX1 630 aaPredicted RBP19.79■□□□□ 0.76
UBE3D-204ENST00000430071 A0A1W2PPC1 479 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 ASB14A6NK59 587 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 SMPD1P17405 629 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 CALML3P27482 149 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 ALDH5A1P51649 535 aaPredicted RBP19.78■□□□□ 0.76
UBE3D-204ENST00000430071 GJA9P57773 515 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 TNFAIP2Q03169 654 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 CCDC178Q5BJE1 867 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 MORC4Q8TE76 937 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 TSEN34Q9BSV6 310 aaKnown RBP19.78■□□□□ 0.76
UBE3D-204ENST00000430071 CNNM2Q9H8M5 875 aa19.78■□□□□ 0.76
UBE3D-204ENST00000430071 GNEQ9Y223 722 aaKnown RBP19.78■□□□□ 0.76
UBE3D-204ENST00000430071 E7EWF7 191 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 ASGR1P07306 291 aa19.77■□□□□ 0.76
UBE3D-204ENST00000430071 RPS6P62753 249 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms