RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 ZFP91Q96JP5 570 aaPredicted RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 BAZ2BQ9UIF8 2168 aaKnown RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 TARSL2A2RTX5 802 aaKnown RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 VGLL3A8MV65 326 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 KLRC4O43908 158 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 ZPR1O75312 459 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 RFC4P35249 363 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 UBE4AQ14139 1066 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 SLC27A3Q5K4L6 730 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 GIMAP8Q8ND71 665 aaPredicted RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 RASGRP4Q8TDF6 673 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 EXOC1Q9NV70 894 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 ZNHIT6Q9NWK9 470 aaKnown RBP16.81■□□□□ 0.28
LINC00839-202ENST00000429940 PCDHA4Q9UN74 947 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 LAMB1P07942 1786 aa16.81■□□□□ 0.28
LINC00839-202ENST00000429940 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 TSPY2A6NKD2 308 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 SYF2O95926 243 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 MYL1P05976 194 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 SRGNP10124 158 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 TRIM21P19474 475 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 FOXR1Q6PIV2 292 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 ANKRD18AQ8IVF6 992 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 CAGE1Q8TC20 777 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 NOC3LQ8WTT2 800 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 PLIN2Q99541 437 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 TUBGCP2Q9BSJ2 902 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 DCP1AQ9NPI6 582 aaPredicted RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 MKRN1Q9UHC7 482 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 NARFQ9UHQ1 456 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 HPCAL4Q9UM19 191 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 SCN7AQ01118 1682 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 CCDC194A0A1B0GVG4 234 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 PLSCR1O15162 318 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 RHOBTB3O94955 611 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 IPO7O95373 1038 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 UBA7P41226 1012 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 CSGALNACT2Q8N6G5 542 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 CRNKL1Q9BZJ0 848 aaKnown RBP16.8■□□□□ 0.28
LINC00839-202ENST00000429940 SH3GLB2Q9NR46 395 aa16.8■□□□□ 0.28
LINC00839-202ENST00000429940 CYP2D6P10635 497 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 EZH2Q15910 746 aaKnown RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 LRRC31Q6UY01 552 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 AFAP1L1Q8TED9 768 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 NSUN4Q96CB9 384 aaKnown RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 NUP58Q9BVL2 599 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 TTYH3Q9C0H2 523 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 LACRTQ9GZZ8 138 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 KAT14Q9H8E8 782 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 NHEJ1Q9H9Q4 299 aaPredicted RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 RCCD1A6NED2 376 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 EIF3CLB5ME19 914 aaKnown RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 KLK7P49862 253 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 MECOMQ03112 1051 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 RCSD1Q6JBY9 416 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 CCDC170Q8IYT3 715 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 COG1Q8WTW3 980 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 FAM84BQ96KN1 310 aaPredicted RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 EIF3CQ99613 913 aaKnown RBP16.79■□□□□ 0.28
LINC00839-202ENST00000429940 TMEM60Q9H2L4 133 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 KBTBD4Q9NVX7 518 aa16.79■□□□□ 0.28
LINC00839-202ENST00000429940 ZMYND10O75800 440 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 PRPF6O94906 941 aaKnown RBP16.78■□□□□ 0.28
LINC00839-202ENST00000429940 DEFB132Q7Z7B7 95 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 RETREG2Q8NC44 543 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 PCMTD1Q96MG8 357 aaPredicted RBP16.78■□□□□ 0.28
LINC00839-202ENST00000429940 DUSP9Q99956 384 aaKnown RBP16.78■□□□□ 0.28
LINC00839-202ENST00000429940 ATP8A2Q9NTI2 1148 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 TFCP2L1Q9NZI6 479 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
LINC00839-202ENST00000429940 UBR3Q6ZT12 1888 aa16.78■□□□□ 0.28
LINC00839-202ENST00000429940 ANO9A1A5B4 782 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 RASSF10A6NK89 507 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 ZNF185O15231 689 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 IDEP14735 1019 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 ZBED6P86452 979 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 TBC1D8BQ0IIM8 1120 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 SEMA3FQ13275 785 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 EEF2KMTQ96G04 330 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 GDAP1L1Q96MZ0 367 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 CCSER1Q9C0I3 900 aa16.77■□□□□ 0.28
LINC00839-202ENST00000429940 MACROD2A1Z1Q3 448 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 M0R2N6 131 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 TYW1BQ6NUM6 668 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 CLEC4GQ6UXB4 293 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 CNOT6LQ96LI5 555 aaKnown RBP16.77■□□□□ 0.27
LINC00839-202ENST00000429940 TNS1Q9HBL0 1735 aaKnown RBP16.77■□□□□ 0.27
LINC00839-202ENST00000429940 JADE2Q9NQC1 790 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 PCDHA6Q9UN73 950 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 PCDHA8Q9Y5H6 950 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 DUSP10Q9Y6W6 482 aa16.77■□□□□ 0.27
LINC00839-202ENST00000429940 KIAA1551Q9HCM1 1747 aa16.76■□□□□ 0.27
LINC00839-202ENST00000429940 INF2Q27J81 1249 aa16.76■□□□□ 0.27
LINC00839-202ENST00000429940 IQCEQ6IPM2 695 aa16.76■□□□□ 0.27
LINC00839-202ENST00000429940 GSPT2Q8IYD1 628 aaKnown RBP16.76■□□□□ 0.27
LINC00839-202ENST00000429940 STAG2Q8N3U4 1231 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms