RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 RMND1Q9NWS8 449 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 TMOD2Q9NZR1 351 aa19.51■□□□□ 0.71
PRDM5-203ENST00000428209 PSMD14O00487 310 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 KCNA3P22001 575 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 MRPL12P52815 198 aaKnown RBP19.5■□□□□ 0.71
PRDM5-203ENST00000428209 CABP7Q86V35 215 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 POTEDQ86YR6 584 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 VSTM4Q8IW00 320 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 CUL5Q93034 780 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 TNNI2P48788 182 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 UBE2SQ16763 222 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 TPD52L1Q16890 204 aaPredicted RBP19.5■□□□□ 0.71
PRDM5-203ENST00000428209 RBM26Q5T8P6 1007 aaKnown RBP19.5■□□□□ 0.71
PRDM5-203ENST00000428209 HDAC9Q9UKV0 1011 aa19.5■□□□□ 0.71
PRDM5-203ENST00000428209 SPDYE2BA6NHP3 402 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 TCP10L2B9ZVM9 353 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 VIL1P09327 827 aaKnown RBP19.49■□□□□ 0.71
PRDM5-203ENST00000428209 SPDYE6P0CI01 402 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 TXKP42681 527 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 OGFOD1Q8N543 542 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 PSTPIP2Q9H939 334 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 INTS13Q9NVM9 706 aa19.49■□□□□ 0.71
PRDM5-203ENST00000428209 F5H6K3 240 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 KLRC3Q07444 240 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 CALCRLQ16602 461 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 PTPN21Q16825 1174 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 ZNF658Q5TYW1 1059 aaPredicted RBP19.48■□□□□ 0.71
PRDM5-203ENST00000428209 SLC16A10Q8TF71 515 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 PRIMPOLQ96LW4 560 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 C16orf45Q96MC5 204 aaPredicted RBP19.48■□□□□ 0.71
PRDM5-203ENST00000428209 CTNND2Q9UQB3 1225 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 CLRN2A0PK11 232 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 NRDCO43847 1150 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 GH2P01242 217 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 DLGAP5Q15398 846 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 QRICH1Q2TAL8 776 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 KBTBD4Q9NVX7 518 aa19.48■□□□□ 0.71
PRDM5-203ENST00000428209 ZBTB12Q9Y330 459 aaPredicted RBP19.48■□□□□ 0.71
PRDM5-203ENST00000428209 UQCRHLA0A096LP55 91 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 TDP2O95551 362 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 UQCRHP07919 91 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 PLCG1P19174 1290 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 CLK2P49760 499 aaKnown RBP19.47■□□□□ 0.71
PRDM5-203ENST00000428209 MTMR9Q96QG7 549 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 CUEDC2Q9H467 287 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 EDIL3O43854 480 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 MYL1P05976 194 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 IGSF22Q8N9C0 903 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 GMLQ99445 158 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.47■□□□□ 0.71
PRDM5-203ENST00000428209 PCDHA1Q9Y5I3 950 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 PSME4Q14997 1843 aa19.47■□□□□ 0.71
PRDM5-203ENST00000428209 SLC37A4O43826 429 aa19.46■□□□□ 0.71
PRDM5-203ENST00000428209 JAG1P78504 1218 aa19.46■□□□□ 0.71
PRDM5-203ENST00000428209 CDC37Q16543 378 aaPredicted RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 GMCL1P1Q8NEA9 526 aa19.46■□□□□ 0.71
PRDM5-203ENST00000428209 HERC5Q9UII4 1024 aaKnown RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 COL2A1P02458 1487 aaPredicted RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 RRP1BQ14684 758 aaKnown RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 LRRC15Q8TF66 581 aa19.46■□□□□ 0.71
PRDM5-203ENST00000428209 NUP88Q99567 741 aaPredicted RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 MAGEF1Q9HAY2 307 aa19.46■□□□□ 0.71
PRDM5-203ENST00000428209 ZNF70Q9UC06 446 aaPredicted RBP19.46■□□□□ 0.71
PRDM5-203ENST00000428209 USP27XA6NNY8 438 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 NDUFB10O96000 172 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 PAK1Q13153 545 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 TMEM266Q2M3C6 531 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 CALML4Q96GE6 196 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 GLT8D2Q9H1C3 349 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 LRWD1Q9UFC0 647 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 RWDD2AQ9UIY3 292 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 GDAQ9Y2T3 454 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 COBLO75128 1261 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 TNNT1P13805 278 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 IKQ13123 557 aaPredicted RBP19.45■□□□□ 0.7
PRDM5-203ENST00000428209 NR1I3Q14994 352 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 KMT5BQ4FZB7 885 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 CDKAL1Q5VV42 579 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 PPP4R3AQ6IN85 833 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 GMCL1Q96IK5 515 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 TRMT1Q9NXH9 659 aaKnown RBP19.45■□□□□ 0.7
PRDM5-203ENST00000428209 MAPK8IP1Q9UQF2 711 aa19.45■□□□□ 0.7
PRDM5-203ENST00000428209 A0A1B0GTH6 734 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 PRCPP42785 496 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 FXR2P51116 673 aaKnown RBP eCLIP19.44■□□□□ 0.7
PRDM5-203ENST00000428209 KCNB1Q14721 858 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 SPECC1LQ69YQ0 1117 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 NIM1KQ8IY84 436 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 FAM151AQ8WW52 585 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 NELFBQ8WX92 580 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 MMTAG2Q9BU76 263 aaKnown RBP19.44■□□□□ 0.7
PRDM5-203ENST00000428209 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 VPS33BQ9H267 617 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 ZNRF3Q9ULT6 936 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 COL4A5P29400 1685 aa19.44■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L15C9J2P7 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L13C9JLJ4 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L11C9JVI0 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L18D6R9N7 530 aa19.43■□□□□ 0.7
PRDM5-203ENST00000428209 USP17L22D6RA61 530 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms