RNA–Protein interactions for RNA: ENST00000422344.5

TRAF4-204, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-204ENST00000422344 ASPRV1Q53RT3 343 aa25.61■■□□□ 1.69
TRAF4-204ENST00000422344 NSMFQ6X4W1 530 aa25.61■■□□□ 1.69
TRAF4-204ENST00000422344 PARP1P09874 1014 aaKnown RBP25.6■■□□□ 1.69
TRAF4-204ENST00000422344 RARBP10826 455 aa25.6■■□□□ 1.69
TRAF4-204ENST00000422344 AKR1A1P14550 325 aa25.6■■□□□ 1.69
TRAF4-204ENST00000422344 SART3Q15020 963 aaKnown RBP25.6■■□□□ 1.69
TRAF4-204ENST00000422344 MUM1L1Q5H9M0 696 aa25.6■■□□□ 1.69
TRAF4-204ENST00000422344 GJC2Q5T442 439 aaPredicted RBP25.6■■□□□ 1.69
TRAF4-204ENST00000422344 ANO2Q9NQ90 1003 aa25.6■■□□□ 1.69
TRAF4-204ENST00000422344 ZHX1Q9UKY1 873 aaPredicted RBP25.6■■□□□ 1.69
TRAF4-204ENST00000422344 KBTBD13C9JR72 458 aa25.59■■□□□ 1.69
TRAF4-204ENST00000422344 IFIT3O14879 490 aaKnown RBP25.59■■□□□ 1.69
TRAF4-204ENST00000422344 DHX16O60231 1041 aaKnown RBP25.59■■□□□ 1.69
TRAF4-204ENST00000422344 TAL1P17542 331 aaPredicted RBP25.59■■□□□ 1.69
TRAF4-204ENST00000422344 RTP1P59025 263 aa25.59■■□□□ 1.69
TRAF4-204ENST00000422344 CNTN2Q02246 1040 aa25.59■■□□□ 1.69
TRAF4-204ENST00000422344 UBA5Q9GZZ9 404 aa25.59■■□□□ 1.69
TRAF4-204ENST00000422344 CDKN2AIPQ9NXV6 580 aaPredicted RBP25.59■■□□□ 1.69
TRAF4-204ENST00000422344 PRKAG2Q9UGJ0 569 aa25.59■■□□□ 1.69
TRAF4-204ENST00000422344 UNC80Q8N2C7 3258 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 SNAI1O95863 264 aaPredicted RBP25.58■■□□□ 1.69
TRAF4-204ENST00000422344 ZNF865P0CJ78 1059 aaPredicted RBP25.58■■□□□ 1.69
TRAF4-204ENST00000422344 SEC23AQ15436 765 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 ARMCX2Q7L311 632 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 FAM133AQ8N9E0 248 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 LSG1Q9H089 658 aaKnown RBP25.58■■□□□ 1.69
TRAF4-204ENST00000422344 XPNPEP3Q9NQH7 507 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 CYP39A1Q9NYL5 469 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 FAM184BQ9ULE4 1060 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 TAF6LQ9Y6J9 622 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 WDR19Q8NEZ3 1342 aa25.58■■□□□ 1.69
TRAF4-204ENST00000422344 ASB14A6NK59 587 aa25.57■■□□□ 1.68
TRAF4-204ENST00000422344 FGD4Q96M96 766 aa25.57■■□□□ 1.68
TRAF4-204ENST00000422344 CPVLQ9H3G5 476 aa25.57■■□□□ 1.68
TRAF4-204ENST00000422344 ABHD16BQ9H3Z7 469 aa25.57■■□□□ 1.68
TRAF4-204ENST00000422344 ATP11BQ9Y2G3 1177 aa25.57■■□□□ 1.68
TRAF4-204ENST00000422344 CDC45O75419 566 aa25.56■■□□□ 1.68
TRAF4-204ENST00000422344 ACVR2BQ13705 512 aa25.56■■□□□ 1.68
TRAF4-204ENST00000422344 WTAPQ15007 396 aa25.56■■□□□ 1.68
TRAF4-204ENST00000422344 CDC37Q16543 378 aaPredicted RBP25.56■■□□□ 1.68
TRAF4-204ENST00000422344 STOX1Q6ZVD7 989 aa25.56■■□□□ 1.68
TRAF4-204ENST00000422344 CCDC144CPQ8IYA2 1237 aa25.56■■□□□ 1.68
TRAF4-204ENST00000422344 PTPDC1A2A3K4 754 aa25.55■■□□□ 1.68
TRAF4-204ENST00000422344 USH1GQ495M9 461 aa25.55■■□□□ 1.68
TRAF4-204ENST00000422344 CHST3Q7LGC8 479 aa25.55■■□□□ 1.68
TRAF4-204ENST00000422344 ADGRF4Q8IZF3 695 aa25.55■■□□□ 1.68
TRAF4-204ENST00000422344 FAM161BQ96MY7 647 aa25.55■■□□□ 1.68
TRAF4-204ENST00000422344 SOWAHBA6NEL2 793 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 NFIBO00712 420 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 BAATQ14032 418 aaPredicted RBP25.54■■□□□ 1.68
TRAF4-204ENST00000422344 LRRC41Q15345 812 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 TMEM67Q5HYA8 995 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 SLC39A5Q6ZMH5 540 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 RNF180Q86T96 592 aa25.54■■□□□ 1.68
TRAF4-204ENST00000422344 ADD3Q9UEY8 706 aaKnown RBP25.54■■□□□ 1.68
TRAF4-204ENST00000422344 SLC27A2O14975 620 aa25.53■■□□□ 1.68
TRAF4-204ENST00000422344 FAM109BQ6ICB4 259 aaPredicted RBP25.53■■□□□ 1.68
TRAF4-204ENST00000422344 RNF207Q6ZRF8 634 aa25.53■■□□□ 1.68
TRAF4-204ENST00000422344 MB21D2Q8IYB1 491 aaPredicted RBP25.53■■□□□ 1.68
TRAF4-204ENST00000422344 GUCD1Q96NT3 240 aa25.53■■□□□ 1.68
TRAF4-204ENST00000422344 VAT1LQ9HCJ6 419 aa25.53■■□□□ 1.68
TRAF4-204ENST00000422344 LTBP2Q14767 1821 aa25.53■■□□□ 1.68
TRAF4-204ENST00000422344 PGK1P00558 417 aa25.52■■□□□ 1.68
TRAF4-204ENST00000422344 CENPBP07199 599 aaPredicted RBP25.52■■□□□ 1.68
TRAF4-204ENST00000422344 CALML3P27482 149 aa25.52■■□□□ 1.68
TRAF4-204ENST00000422344 RNF20Q5VTR2 975 aa25.52■■□□□ 1.68
TRAF4-204ENST00000422344 CREB3L3Q68CJ9 461 aa25.52■■□□□ 1.68
TRAF4-204ENST00000422344 LENG1Q96BZ8 264 aaPredicted RBP25.52■■□□□ 1.68
TRAF4-204ENST00000422344 PRDM5Q9NQX1 630 aaPredicted RBP25.52■■□□□ 1.68
TRAF4-204ENST00000422344 KLRF2D3W0D1 207 aa25.51■■□□□ 1.67
TRAF4-204ENST00000422344 CCDC144BQ3MJ40 725 aa25.51■■□□□ 1.67
TRAF4-204ENST00000422344 CATIPQ7Z7H3 387 aa25.51■■□□□ 1.67
TRAF4-204ENST00000422344 CLEC4DQ8WXI8 215 aa25.51■■□□□ 1.67
TRAF4-204ENST00000422344 ABCB11O95342 1321 aa25.51■■□□□ 1.67
TRAF4-204ENST00000422344 MCM5P33992 734 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 ADCYAP1R1P41586 468 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 ANTXR2P58335 489 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 NECTIN1Q15223 517 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 QRICH1Q2TAL8 776 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 TRIM60Q495X7 471 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 SLC30A10Q6XR72 485 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 FBXO11Q86XK2 927 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 STAG2Q8N3U4 1231 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 FERMT2Q96AC1 680 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 MPHOSPH6Q99547 160 aaKnown RBP25.5■■□□□ 1.67
TRAF4-204ENST00000422344 JMJD4Q9H9V9 463 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 SPC25Q9HBM1 224 aa25.5■■□□□ 1.67
TRAF4-204ENST00000422344 SMCHD1A6NHR9 2005 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 MCM3APO60318 1980 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 SYNRGQ9UMZ2 1314 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 PRC1O43663 620 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 DUSP11O75319 330 aaKnown RBP25.49■■□□□ 1.67
TRAF4-204ENST00000422344 GRM4Q14833 912 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 SHHQ15465 462 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 NOL8Q76FK4 1167 aaKnown RBP25.49■■□□□ 1.67
TRAF4-204ENST00000422344 PURBQ96QR8 312 aaKnown RBP25.49■■□□□ 1.67
TRAF4-204ENST00000422344 SENP2Q9HC62 589 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 MAD2L2Q9UI95 211 aa25.49■■□□□ 1.67
TRAF4-204ENST00000422344 ASTN1O14525 1302 aa25.48■■□□□ 1.67
TRAF4-204ENST00000422344 PALM3A6NDB9 673 aaPredicted RBP25.48■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms