RNA–Protein interactions for RNA: ENST00000421870.1

LINC01840-201, Transcript of long intergenic non-protein coding RNA 1840, humanhuman

TSL 4 BASIC

Gene LINC01840, Length 571 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01840-201ENST00000421870 XPNPEP3Q9NQH7 507 aa17.33■□□□□ 0.36
LINC01840-201ENST00000421870 ERICH2A1L162 156 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 ASB14A6NK59 587 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 NFIBO00712 420 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 SLC27A2O14975 620 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 ANTXR2P58335 489 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 BAATQ14032 418 aaPredicted RBP17.32■□□□□ 0.36
LINC01840-201ENST00000421870 LRRC26Q2I0M4 334 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 NSMFQ6X4W1 530 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 CHST3Q7LGC8 479 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 STAG2Q8N3U4 1231 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 MORC4Q8TE76 937 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 JMJD4Q9H9V9 463 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 MAD2L2Q9UI95 211 aa17.32■□□□□ 0.36
LINC01840-201ENST00000421870 COLQQ9Y215 455 aaPredicted RBP17.32■□□□□ 0.36
LINC01840-201ENST00000421870 LOC102724159A0A0B4J2E5 919 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 KBTBD13C9JR72 458 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 KLRF2D3W0D1 207 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 ADAMTS4O75173 837 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 DUSP11O75319 330 aaKnown RBP17.31■□□□□ 0.36
LINC01840-201ENST00000421870 TROAPQ12815 778 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 WTAPQ15007 396 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 SART3Q15020 963 aaKnown RBP17.31■□□□□ 0.36
LINC01840-201ENST00000421870 PWP2Q15269 919 aaKnown RBP17.31■□□□□ 0.36
LINC01840-201ENST00000421870 CCDC144BQ3MJ40 725 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 CREB3L3Q68CJ9 461 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 MTMR8Q96EF0 704 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 PURBQ96QR8 312 aaKnown RBP17.31■□□□□ 0.36
LINC01840-201ENST00000421870 PRO3102Q9H379 93 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 SENP2Q9HC62 589 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 ANO2Q9NQ90 1003 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 CEP290O15078 2479 aa17.31■□□□□ 0.36
LINC01840-201ENST00000421870 CDC45O75419 566 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 NEFLP07196 543 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 NKX3-2P78367 333 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 CDC37Q16543 378 aaPredicted RBP17.3■□□□□ 0.36
LINC01840-201ENST00000421870 SLC39A5Q6ZMH5 540 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 RNF207Q6ZRF8 634 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 RNF180Q86T96 592 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 KLHDC9Q8NEP7 349 aa17.3■□□□□ 0.36
LINC01840-201ENST00000421870 ADD3Q9UEY8 706 aaKnown RBP17.3■□□□□ 0.36
LINC01840-201ENST00000421870 ZHX1Q9UKY1 873 aaPredicted RBP17.3■□□□□ 0.36
LINC01840-201ENST00000421870 ADCY6O43306 1168 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 PGK1P00558 417 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 ADCYAP1R1P41586 468 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 GRM4Q14833 912 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 QRICH1Q2TAL8 776 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 TSGA10IPQ3SY00 556 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 TMEM67Q5HYA8 995 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 HABP4Q5JVS0 413 aaKnown RBP17.29■□□□□ 0.36
LINC01840-201ENST00000421870 C1orf53Q5VUE5 145 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 CCSAPQ6IQ19 270 aaPredicted RBP17.29■□□□□ 0.36
LINC01840-201ENST00000421870 CASC1Q6TDU7 716 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 C7orf61Q8IZ16 206 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 MAP3K14Q99558 947 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 TSEN34Q9BSV6 310 aaKnown RBP17.29■□□□□ 0.36
LINC01840-201ENST00000421870 RIOX1Q9H6W3 641 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 VAT1LQ9HCJ6 419 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 PHF24Q9UPV7 400 aa17.29■□□□□ 0.36
LINC01840-201ENST00000421870 ABCB11O95342 1321 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 MCM5P33992 734 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 GJA9P57773 515 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 RPS6P62753 249 aaKnown RBP17.28■□□□□ 0.36
LINC01840-201ENST00000421870 COL9A3Q14050 684 aaPredicted RBP17.28■□□□□ 0.36
LINC01840-201ENST00000421870 SNX17Q15036 470 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 USH1GQ495M9 461 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 IQSEC1Q6DN90 963 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 TAPT1Q6NXT6 567 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 SLC30A10Q6XR72 485 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 FBXO11Q86XK2 927 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 TMTC2Q8N394 836 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 DNERQ8NFT8 737 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
LINC01840-201ENST00000421870 TMEM87BQ96K49 555 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 UPF3AQ9H1J1 476 aaKnown RBP17.28■□□□□ 0.36
LINC01840-201ENST00000421870 LY9Q9HBG7 655 aa17.28■□□□□ 0.36
LINC01840-201ENST00000421870 BAZ2BQ9UIF8 2168 aaKnown RBP17.28■□□□□ 0.36
LINC01840-201ENST00000421870 SYNRGQ9UMZ2 1314 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 PRC1O43663 620 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 MYCNP04198 464 aaPredicted RBP17.27■□□□□ 0.36
LINC01840-201ENST00000421870 CST5P28325 142 aaPredicted RBP17.27■□□□□ 0.36
LINC01840-201ENST00000421870 LIFRP42702 1097 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 ALDH5A1P51649 535 aaPredicted RBP17.27■□□□□ 0.36
LINC01840-201ENST00000421870 ATN1P54259 1190 aaPredicted RBP17.27■□□□□ 0.36
LINC01840-201ENST00000421870 SLC35G1Q2M3R5 365 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 RNF20Q5VTR2 975 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 CHRDL2Q6WN34 429 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 CATIPQ7Z7H3 387 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 TBC1D5Q92609 795 aa17.27■□□□□ 0.36
LINC01840-201ENST00000421870 GNEQ9Y223 722 aaKnown RBP17.27■□□□□ 0.36
LINC01840-201ENST00000421870 LRRC37A2A6NM11 1700 aa17.27■□□□□ 0.35
LINC01840-201ENST00000421870 ZBTB5O15062 677 aa17.26■□□□□ 0.35
LINC01840-201ENST00000421870 CYTH3O43739 400 aa17.26■□□□□ 0.35
LINC01840-201ENST00000421870 DHX16O60231 1041 aaKnown RBP17.26■□□□□ 0.35
LINC01840-201ENST00000421870 EDNRBP24530 442 aa17.26■□□□□ 0.35
LINC01840-201ENST00000421870 CALML3P27482 149 aa17.26■□□□□ 0.35
LINC01840-201ENST00000421870 TNFAIP2Q03169 654 aa17.26■□□□□ 0.35
LINC01840-201ENST00000421870 GDF15Q99988 308 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms