RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 SGMS1Q86VZ5 419 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 SKAP1Q86WV1 359 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 DNERQ8NFT8 737 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 PAWRQ96IZ0 340 aaKnown RBP17.25■□□□□ 0.35
FAM3A-209ENST00000421517 C11orf49Q9H6J7 331 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 RIOX1Q9H6W3 641 aa17.25■□□□□ 0.35
FAM3A-209ENST00000421517 KLRF2D3W0D1 207 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 GOLGA8HP0CJ92 632 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 CALM1P0DP23 149 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 CALM2P0DP24 149 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 CALM3P0DP25 149 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 CNGA1P29973 690 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 NKX3-2P78367 333 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 MUM1L1Q5H9M0 696 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 LZTS2Q9BRK4 669 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 JMJD4Q9H9V9 463 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 LY9Q9HBG7 655 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 HOMER2Q9NSB8 354 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 FAM184BQ9ULE4 1060 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 PLXNA1Q9UIW2 1896 aa17.24■□□□□ 0.35
FAM3A-209ENST00000421517 PRC1O43663 620 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 RARBP10826 455 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 KIF5BP33176 963 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 ACVR2BQ13705 512 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 CDC37Q16543 378 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-209ENST00000421517 ARMCX2Q7L311 632 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 MCF2L2Q86YR7 1114 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 FBXL16Q8N461 479 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 MPHOSPH6Q99547 160 aaKnown RBP17.23■□□□□ 0.35
FAM3A-209ENST00000421517 UBA5Q9GZZ9 404 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.23■□□□□ 0.35
FAM3A-209ENST00000421517 NR2E3Q9Y5X4 410 aa17.23■□□□□ 0.35
FAM3A-209ENST00000421517 SOWAHBA6NEL2 793 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 B4DLN1 442 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 SH2B2O14492 632 aaPredicted RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 ZBTB5O15062 677 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 EIF5BO60841 1220 aaKnown RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 DUSP11O75319 330 aaKnown RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 HSPA4P34932 840 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 SLC4A3P48751 1232 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 GNAQP50148 359 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 MRPL12P52815 198 aaKnown RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 RCAN1P53805 252 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 EXOSC10Q01780 885 aaKnown RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 C1orf53Q5VUE5 145 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 CCDC144CPQ8IYA2 1237 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 AMNQ9BXJ7 453 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 KATNBL1Q9H079 304 aa17.22■□□□□ 0.35
FAM3A-209ENST00000421517 MRPL11Q9Y3B7 192 aaKnown RBP17.22■□□□□ 0.35
FAM3A-209ENST00000421517 SNAP25P60880 206 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 CNTN2Q02246 1040 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 BAATQ14032 418 aaPredicted RBP17.21■□□□□ 0.35
FAM3A-209ENST00000421517 QRICH1Q2TAL8 776 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 PRAMEF19Q5SWL8 479 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 RNF207Q6ZRF8 634 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 DHX32Q7L7V1 743 aaKnown RBP17.21■□□□□ 0.35
FAM3A-209ENST00000421517 FBXO11Q86XK2 927 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 STAG2Q8N3U4 1231 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
FAM3A-209ENST00000421517 SPZ1Q9BXG8 430 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 VTA1Q9NP79 307 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 Q9Y3F1 56 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 FRMPD3Q5JV73 1810 aa17.21■□□□□ 0.35
FAM3A-209ENST00000421517 NFIBO00712 420 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 EDNRBP24530 442 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 CST5P28325 142 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-209ENST00000421517 RPS6P62753 249 aaKnown RBP17.2■□□□□ 0.34
FAM3A-209ENST00000421517 PPP2R5BQ15173 497 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 NSMFQ6X4W1 530 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 RNF180Q86T96 592 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 CTCFLQ8NI51 663 aaPredicted RBP17.2■□□□□ 0.34
FAM3A-209ENST00000421517 CHMP4CQ96CF2 233 aa17.2■□□□□ 0.34
FAM3A-209ENST00000421517 PNMA6FA0A0J9YX94 578 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 CCDC69A6NI79 296 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 KBTBD13C9JR72 458 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 IQSEC1Q6DN90 963 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 CHST3Q7LGC8 479 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 DIS3LQ8TF46 1054 aaKnown RBP17.19■□□□□ 0.34
FAM3A-209ENST00000421517 DPF3Q92784 378 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 SENP2Q9HC62 589 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 XPNPEP3Q9NQH7 507 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 ASTN1O14525 1302 aa17.19■□□□□ 0.34
FAM3A-209ENST00000421517 RBM47A0AV96 593 aaKnown RBP17.18■□□□□ 0.34
FAM3A-209ENST00000421517 PTPDC1A2A3K4 754 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 MOXD2PA6NHM9 499 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 EVI5O60447 810 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 ADAMTS4O75173 837 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 TAL1P17542 331 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-209ENST00000421517 ALDH5A1P51649 535 aaPredicted RBP17.18■□□□□ 0.34
FAM3A-209ENST00000421517 LRRC41Q15345 812 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 RASEFQ8IZ41 740 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 KLHDC9Q8NEP7 349 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 IWS1Q96ST2 819 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 UPF3AQ9H1J1 476 aaKnown RBP17.18■□□□□ 0.34
FAM3A-209ENST00000421517 CPVLQ9H3G5 476 aa17.18■□□□□ 0.34
FAM3A-209ENST00000421517 PHF24Q9UPV7 400 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms