RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 MUM1L1Q5H9M0 696 aa13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 CPVLQ9H3G5 476 aa13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 RBM8AQ9Y5S9 174 aaKnown RBP13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 TAF6LQ9Y6J9 622 aa13.71□□□□□ -0.21
THUMPD3-204ENST00000419437 E7EWF7 191 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 SNAI1O95863 264 aaPredicted RBP13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 ICAM1P05362 532 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 SNHG28P0DPA3 235 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 LRRC41Q15345 812 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 GPATCH4Q5T3I0 446 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 IFIT1BQ5T764 474 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 NSMFQ6X4W1 530 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 CHST3Q7LGC8 479 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 ESYT1Q9BSJ8 1104 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 RANBP17Q9H2T7 1088 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 A1CFQ9NQ94 594 aaKnown RBP13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 CNPY2Q9Y2B0 182 aa13.7□□□□□ -0.22
THUMPD3-204ENST00000419437 IFIT3O14879 490 aaKnown RBP13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 SMAD3P84022 425 aaKnown RBP13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 SHHQ15465 462 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 TRIM60Q495X7 471 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 BMP2KLQ5H9B9 411 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 RALYLQ86SE5 291 aaKnown RBP13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 NCOA7Q8NI08 942 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 LSG1Q9H089 658 aaKnown RBP13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 PDLIM7Q9NR12 457 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 PHF24Q9UPV7 400 aa13.69□□□□□ -0.22
THUMPD3-204ENST00000419437 TRANK1O15050 2925 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 SOWAHBA6NEL2 793 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 RARBP10826 455 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 ADCYAP1R1P41586 468 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 SEC23AQ15436 765 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 MAMDC4Q6UXC1 1216 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 STOX1Q6ZVD7 989 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 ZNF467Q7Z7K2 595 aaPredicted RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 MSL3Q8N5Y2 521 aaKnown RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 FAM133AQ8N9E0 248 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 FGD4Q96M96 766 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 COL25A1Q9BXS0 654 aaPredicted RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 ANO2Q9NQ90 1003 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 XPNPEP3Q9NQH7 507 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 PRDM5Q9NQX1 630 aaPredicted RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 CYP39A1Q9NYL5 469 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 CHD7Q9P2D1 2997 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 ZHX1Q9UKY1 873 aaPredicted RBP13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 FAM184BQ9ULE4 1060 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 TTC28Q96AY4 2481 aa13.68□□□□□ -0.22
THUMPD3-204ENST00000419437 SYNGAP1Q96PV0 1343 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 ERICH2A1L162 156 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 DHX16O60231 1041 aaKnown RBP13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 PARP1P09874 1014 aaKnown RBP13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 ACVR2BQ13705 512 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 BAATQ14032 418 aaPredicted RBP13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 C9orf50Q5SZB4 431 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 ARMCX2Q7L311 632 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 RNF180Q86T96 592 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 CCDC144CPQ8IYA2 1237 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 ADGRF4Q8IZF3 695 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 STAG2Q8N3U4 1231 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 BADQ92934 168 aa13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 PURBQ96QR8 312 aaKnown RBP13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
THUMPD3-204ENST00000419437 TMEM265A0A087WTH1 108 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 PTPDC1A2A3K4 754 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 TRIM43BA6NCK2 446 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 NFIBO00712 420 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 PGK1P00558 417 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 AKR1A1P14550 325 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 WTAPQ15007 396 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 USH1GQ495M9 461 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 ASPRV1Q53RT3 343 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 FERMT2Q96AC1 680 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 TRIM43Q96BQ3 446 aaPredicted RBP13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 LENG1Q96BZ8 264 aaPredicted RBP13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 FAM161BQ96MY7 647 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 CDX2Q99626 313 aaPredicted RBP13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 SEMA6BQ9H3T3 888 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 SENP2Q9HC62 589 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 DDX49Q9Y6V7 483 aaKnown RBP13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 REV3LO60673 3130 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 LAMA4Q16363 1823 aa13.66□□□□□ -0.22
THUMPD3-204ENST00000419437 ASB14A6NK59 587 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 SLC27A2O14975 620 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 KIAA0355O15063 1070 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 CLTBP09497 229 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 CALML3P27482 149 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 TLE2Q04725 743 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 SART3Q15020 963 aaKnown RBP13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 CCDC144BQ3MJ40 725 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 TMEM67Q5HYA8 995 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 CASC1Q6TDU7 716 aa13.65□□□□□ -0.22
THUMPD3-204ENST00000419437 EEPD1Q7L9B9 569 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms