RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 MAD2L2Q9UI95 211 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 ASTN1O14525 1302 aa23.72■■□□□ 1.39
GTF3A-202ENST00000419181 LRRC37A2A6NM11 1700 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 DNM1LO00429 736 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 AKR1A1P14550 325 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 TMEM67Q5HYA8 995 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 CCDC144CPQ8IYA2 1237 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 MTA3Q9BTC8 594 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 NR2E3Q9Y5X4 410 aa23.71■■□□□ 1.39
GTF3A-202ENST00000419181 PALM3A6NDB9 673 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-202ENST00000419181 KLRF2D3W0D1 207 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 TROAPQ12815 778 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 COL9A3Q14050 684 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-202ENST00000419181 GRM4Q14833 912 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 ARRDC4Q8NCT1 418 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 ABHD16BQ9H3Z7 469 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 JMJD4Q9H9V9 463 aa23.7■■□□□ 1.38
GTF3A-202ENST00000419181 ZHX1Q9UKY1 873 aaPredicted RBP23.7■■□□□ 1.38
GTF3A-202ENST00000419181 PRC1O43663 620 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 EVI5O60447 810 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 RARBP10826 455 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 MCM5P33992 734 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 ACVR2BQ13705 512 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 BAATQ14032 418 aaPredicted RBP23.69■■□□□ 1.38
GTF3A-202ENST00000419181 GJC2Q5T442 439 aaPredicted RBP23.69■■□□□ 1.38
GTF3A-202ENST00000419181 RNF20Q5VTR2 975 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 KATNBL1Q9H079 304 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 LY9Q9HBG7 655 aa23.69■■□□□ 1.38
GTF3A-202ENST00000419181 ASB14A6NK59 587 aa23.68■■□□□ 1.38
GTF3A-202ENST00000419181 DHX16O60231 1041 aaKnown RBP23.68■■□□□ 1.38
GTF3A-202ENST00000419181 QRICH1Q2TAL8 776 aa23.68■■□□□ 1.38
GTF3A-202ENST00000419181 USH1GQ495M9 461 aa23.68■■□□□ 1.38
GTF3A-202ENST00000419181 PURBQ96QR8 312 aaKnown RBP23.68■■□□□ 1.38
GTF3A-202ENST00000419181 XPNPEP3Q9NQH7 507 aa23.68■■□□□ 1.38
GTF3A-202ENST00000419181 GPHNQ9NQX3 736 aaPredicted RBP23.68■■□□□ 1.38
GTF3A-202ENST00000419181 FAM184BQ9ULE4 1060 aa23.68■■□□□ 1.38
GTF3A-202ENST00000419181 PTPDC1A2A3K4 754 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 SLC34A2O95436 690 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 LRRC41Q15345 812 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 HABP4Q5JVS0 413 aaKnown RBP23.67■■□□□ 1.38
GTF3A-202ENST00000419181 SLC30A10Q6XR72 485 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 RNF207Q6ZRF8 634 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 CATIPQ7Z7H3 387 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 LENG1Q96BZ8 264 aaPredicted RBP23.67■■□□□ 1.38
GTF3A-202ENST00000419181 MTMR8Q96EF0 704 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 TMEM87BQ96K49 555 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 VAT1LQ9HCJ6 419 aa23.67■■□□□ 1.38
GTF3A-202ENST00000419181 ABCB11O95342 1321 aa23.66■■□□□ 1.38
GTF3A-202ENST00000419181 KBTBD13C9JR72 458 aa23.66■■□□□ 1.38
GTF3A-202ENST00000419181 SH2B2O14492 632 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-202ENST00000419181 SLC35G1Q2M3R5 365 aa23.66■■□□□ 1.38
GTF3A-202ENST00000419181 MORC4Q8TE76 937 aa23.66■■□□□ 1.38
GTF3A-202ENST00000419181 SENP6Q9GZR1 1112 aaPredicted RBP23.66■■□□□ 1.38
GTF3A-202ENST00000419181 DNAH12Q6ZR08 3092 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 RPS6P62753 249 aaKnown RBP23.65■■□□□ 1.38
GTF3A-202ENST00000419181 CCDC144BQ3MJ40 725 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 TSGA10IPQ3SY00 556 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 FBXO11Q86XK2 927 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 RGS22Q8NE09 1264 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 MAF1Q9H063 256 aa23.65■■□□□ 1.38
GTF3A-202ENST00000419181 ADD3Q9UEY8 706 aaKnown RBP23.65■■□□□ 1.38
GTF3A-202ENST00000419181 COLQQ9Y215 455 aaPredicted RBP23.65■■□□□ 1.38
GTF3A-202ENST00000419181 DDX49Q9Y6V7 483 aaKnown RBP23.65■■□□□ 1.38
GTF3A-202ENST00000419181 BAZ2BQ9UIF8 2168 aaKnown RBP23.65■■□□□ 1.38
GTF3A-202ENST00000419181 LOC102724159A0A0B4J2E5 919 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 ADCY6O43306 1168 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 ADAMTS4O75173 837 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 DDAH1O94760 285 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 PGK1P00558 417 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 MYCNP04198 464 aaPredicted RBP23.64■■□□□ 1.37
GTF3A-202ENST00000419181 CALML3P27482 149 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 ALDH5A1P51649 535 aaPredicted RBP23.64■■□□□ 1.37
GTF3A-202ENST00000419181 PWP2Q15269 919 aaKnown RBP23.64■■□□□ 1.37
GTF3A-202ENST00000419181 LRRC26Q2I0M4 334 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 RASEFQ8IZ41 740 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 ZNF654Q8IZM8 581 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 TMTC2Q8N394 836 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 MAP3K14Q99558 947 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 RIOX1Q9H6W3 641 aa23.64■■□□□ 1.37
GTF3A-202ENST00000419181 SYNRGQ9UMZ2 1314 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 ZBTB5O15062 677 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 DUSP11O75319 330 aaKnown RBP23.63■■□□□ 1.37
GTF3A-202ENST00000419181 LIFRP42702 1097 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 CHRDL2Q6WN34 429 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 RNF180Q86T96 592 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 C7orf61Q8IZ16 206 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 AMNQ9BXJ7 453 aa23.63■■□□□ 1.37
GTF3A-202ENST00000419181 CYTH3O43739 400 aa23.62■■□□□ 1.37
GTF3A-202ENST00000419181 PPP1R11O60927 126 aaPredicted RBP23.62■■□□□ 1.37
GTF3A-202ENST00000419181 NUP133Q8WUM0 1156 aa23.62■■□□□ 1.37
GTF3A-202ENST00000419181 NEK1Q96PY6 1258 aa23.62■■□□□ 1.37
GTF3A-202ENST00000419181 MYL10Q9BUA6 226 aa23.62■■□□□ 1.37
GTF3A-202ENST00000419181 PHF24Q9UPV7 400 aa23.62■■□□□ 1.37
GTF3A-202ENST00000419181 MRPL11Q9Y3B7 192 aaKnown RBP23.62■■□□□ 1.37
GTF3A-202ENST00000419181 ADCK5Q3MIX3 580 aa23.61■■□□□ 1.37
GTF3A-202ENST00000419181 FBXO16Q8IX29 292 aaPredicted RBP23.61■■□□□ 1.37
GTF3A-202ENST00000419181 DNERQ8NFT8 737 aa23.61■■□□□ 1.37
GTF3A-202ENST00000419181 KCNB2Q92953 911 aa23.61■■□□□ 1.37
GTF3A-202ENST00000419181 LRRC2Q9BYS8 371 aa23.61■■□□□ 1.37
GTF3A-202ENST00000419181 VTA1Q9NP79 307 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms