RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 ADD3Q9UEY8 706 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-202ENST00000418713 SEC63Q9UGP8 760 aaKnown RBP23.01■■□□□ 1.27
RPUSD3-202ENST00000418713 DNAJC25-GNG10A0A024R161 153 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 LOC102724159A0A0B4J2E5 919 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 PNMA6FA0A0J9YX94 578 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 MSCO60682 206 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 PGK2P07205 417 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 PWP2Q15269 919 aaKnown RBP23■■□□□ 1.27
RPUSD3-202ENST00000418713 QRICH1Q2TAL8 776 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 MAP3K21Q5TCX8 1036 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 NSMFQ6X4W1 530 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 MTMR8Q96EF0 704 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 TINF2Q9BSI4 451 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 SPZ1Q9BXG8 430 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 A1CFQ9NQ94 594 aaKnown RBP23■■□□□ 1.27
RPUSD3-202ENST00000418713 GPHNQ9NQX3 736 aaPredicted RBP23■■□□□ 1.27
RPUSD3-202ENST00000418713 MAP3K20Q9NYL2 800 aaKnown RBP23■■□□□ 1.27
RPUSD3-202ENST00000418713 CNPY2Q9Y2B0 182 aa23■■□□□ 1.27
RPUSD3-202ENST00000418713 ASB14A6NK59 587 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 MYCP01106 439 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 CACNB2Q08289 660 aaPredicted RBP22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 MTFR1Q15390 333 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 CCL14Q16627 93 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 APOA5Q6Q788 366 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 UNC93B1Q9H1C4 597 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 GTF3C3Q9Y5Q9 886 aa22.99■■□□□ 1.27
RPUSD3-202ENST00000418713 KLF18A0A0U1RQI7 1052 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 USH1GQ495M9 461 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 MAMDC4Q6UXC1 1216 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 RNF207Q6ZRF8 634 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 MICU3Q86XE3 530 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 MYL10Q9BUA6 226 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 CPVLQ9H3G5 476 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 UPF2Q9HAU5 1272 aaKnown RBP22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 PAK6Q9NQU5 681 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 CYP39A1Q9NYL5 469 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 NAP1L2Q9ULW6 460 aaPredicted RBP22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 SYNGAP1Q96PV0 1343 aa22.98■■□□□ 1.27
RPUSD3-202ENST00000418713 PTPDC1A2A3K4 754 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 SGPL1O95470 568 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 GJA8P48165 433 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 SOX10P56693 466 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 RTN1Q16799 776 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 MUM1L1Q5H9M0 696 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 HOMER1Q86YM7 354 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 BRF1Q92994 677 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 TCEANC2Q96MN5 208 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 AGXT2Q9BYV1 514 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 FLRT1Q9NZU1 646 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 PCDHA1Q9Y5I3 950 aa22.97■■□□□ 1.27
RPUSD3-202ENST00000418713 TFRCP02786 760 aaKnown RBP22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 RGS19P49795 217 aa22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 ANKRD1Q15327 319 aa22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 FAM133AQ8N9E0 248 aa22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 PIGSQ96S52 555 aa22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 PDRG1Q9NUG6 133 aa22.96■■□□□ 1.27
RPUSD3-202ENST00000418713 GOLGA8AA7E2F4 631 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 GOLGA8BA8MQT2 603 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 IGHA2P01877 340 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 CNGA1P29973 690 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 CYP2C19P33261 490 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 METAP2P50579 478 aaKnown RBP eCLIP22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 DNERQ8NFT8 737 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 U2AF1L4Q8WU68 220 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 DEFB118Q96PH6 123 aa22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 RBM27Q9P2N5 1060 aaKnown RBP22.95■■□□□ 1.26
RPUSD3-202ENST00000418713 KIAA0100Q14667 2235 aaKnown RBP22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 CPA1P15085 419 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 BAATQ14032 418 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 TMTC3Q6ZXV5 915 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 CCDC144CPQ8IYA2 1237 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 IL27Q8NEV9 243 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 CLEC4DQ8WXI8 215 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 ALDH8A1Q9H2A2 487 aaPredicted RBP22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 ABHD16BQ9H3Z7 469 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 BRPF3Q9ULD4 1205 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 MYH6P13533 1939 aa22.94■■□□□ 1.26
RPUSD3-202ENST00000418713 NFIBO00712 420 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 CYTH3O43739 400 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 RXRAP19793 462 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 EVCP57679 992 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 APOBRQ0VD83 1088 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 TRIM32Q13049 653 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 C8orf34Q49A92 452 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 ANKLE1Q8NAG6 615 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 IL17RAQ96F46 866 aa22.93■■□□□ 1.26
RPUSD3-202ENST00000418713 SEPT4O43236 478 aa22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 CYBAP13498 195 aa22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 CALML3P27482 149 aa22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 RPS6P62753 249 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 COL9A3Q14050 684 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 TEX2Q8IWB9 1127 aa22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 SRBD1Q8N5C6 995 aaKnown RBP22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 ZNF274Q96GC6 653 aaPredicted RBP22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 PLXNA1Q9UIW2 1896 aa22.92■■□□□ 1.26
RPUSD3-202ENST00000418713 POTEFA5A3E0 1075 aa22.91■■□□□ 1.26
RPUSD3-202ENST00000418713 AKAP17AQ02040 695 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-202ENST00000418713 CPLX2Q6PUV4 134 aaKnown RBP22.91■■□□□ 1.26
RPUSD3-202ENST00000418713 CUL5Q93034 780 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms