RNA–Protein interactions for RNA: ENST00000413805.2

HMGN1P37-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 37, humanhuman

BASIC

Gene HMGN1P37, Length 303 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P37-201ENST00000413805 DUSP11O75319 330 aaKnown RBP13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 CALML3P27482 149 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 ACLYP53396 1101 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 IRX5P78411 483 aaPredicted RBP13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 TNFAIP2Q03169 654 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 TLE2Q04725 743 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 BAATQ14032 418 aaPredicted RBP13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 USH1GQ495M9 461 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 GNASQ5JWF2 1037 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 FAM133AQ8N9E0 248 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 NUP133Q8WUM0 1156 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 PURBQ96QR8 312 aaKnown RBP13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 UBAC1Q9BSL1 405 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 DSCC1Q9BVC3 393 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 UBA5Q9GZZ9 404 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 RANBP17Q9H2T7 1088 aaKnown RBP13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 STARD7Q9NQZ5 370 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 CYP39A1Q9NYL5 469 aa13.22□□□□□ -0.29
HMGN1P37-201ENST00000413805 MYADML2A6NDP7 307 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 ADAMTS4O75173 837 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 NOVP48745 357 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 ZNF543Q08ER8 600 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 CCDC178Q5BJE1 867 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 PNMA1Q8ND90 353 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 BADQ92934 168 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 FGD4Q96M96 766 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 KRT23Q9C075 422 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 CPVLQ9H3G5 476 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 VAT1LQ9HCJ6 419 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 ZSWIM5Q9P217 1185 aa13.21□□□□□ -0.29
HMGN1P37-201ENST00000413805 LAMA4Q16363 1823 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 NFIBO00712 420 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 ADCY6O43306 1168 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 ASGR1P07306 291 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 GSPT1P15170 499 aaKnown RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 BEX3Q00994 111 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 TRDNQ13061 729 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 BTNL9Q6UXG8 535 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 DGKHQ86XP1 1220 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 FBXO16Q8IX29 292 aaPredicted RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 PCSK9Q8NBP7 692 aaKnown RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 GLT1D1Q96MS3 346 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 TSEN34Q9BSV6 310 aaKnown RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 CNNM2Q9H8M5 875 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 TMEM39AQ9NV64 488 aa13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 ADD3Q9UEY8 706 aaKnown RBP13.2□□□□□ -0.3
HMGN1P37-201ENST00000413805 TNKSO95271 1327 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 MOXD2PA6NHM9 499 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 DCDC2CA8MYV0 355 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 DYNC1LI2O43237 492 aaPredicted RBP13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 CLTBP09497 229 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 RAG1P15918 1043 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 GPATCH4Q5T3I0 446 aaKnown RBP13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 IFIT1BQ5T764 474 aaKnown RBP13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 RNF207Q6ZRF8 634 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 KIAA1211Q6ZU35 1233 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 IL25Q9H293 177 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 PDGFCQ9NRA1 345 aa13.19□□□□□ -0.3
HMGN1P37-201ENST00000413805 RANBP2P49792 3224 aaKnown RBP13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 TRIM43BA6NCK2 446 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 PARP1P09874 1014 aaKnown RBP13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 PTGS1P23219 599 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 SNX17Q15036 470 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 SLC30A10Q6XR72 485 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 TLK2Q86UE8 772 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 ENAHQ8N8S7 591 aaPredicted RBP13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 TRIM43Q96BQ3 446 aaPredicted RBP13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 MPHOSPH6Q99547 160 aaKnown RBP13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 PNMA2Q9UL42 364 aa13.18□□□□□ -0.3
HMGN1P37-201ENST00000413805 SMPD1P17405 629 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 CHMLP26374 656 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 ALDH5A1P51649 535 aaPredicted RBP13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 GJA9P57773 515 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 PTH1RQ03431 593 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 PDE4DQ08499 809 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 CDC37Q16543 378 aaPredicted RBP13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 Q7L0L9 218 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 ADGRF4Q8IZF3 695 aa13.17□□□□□ -0.3
HMGN1P37-201ENST00000413805 ASTN1O14525 1302 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 ERICH2A1L162 156 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 ZEB2O60315 1214 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 SNHG28P0DPA3 235 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 RPS6P62753 249 aaKnown RBP13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 SHHQ15465 462 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 FSCN1Q16658 493 aaKnown RBP13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 LRIT3Q3SXY7 679 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 ASPRV1Q53RT3 343 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 TMEM63BQ5T3F8 832 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 C1orf53Q5VUE5 145 aa13.16□□□□□ -0.3
HMGN1P37-201ENST00000413805 CXCL17Q6UXB2 119 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms