RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 GJC2Q5T442 439 aaPredicted RBP17.3■□□□□ 0.36
LIMS4-201ENST00000413601 ARMCX2Q7L311 632 aa17.3■□□□□ 0.36
LIMS4-201ENST00000413601 CCDC144CPQ8IYA2 1237 aa17.3■□□□□ 0.36
LIMS4-201ENST00000413601 IGDCC4Q8TDY8 1250 aa17.3■□□□□ 0.36
LIMS4-201ENST00000413601 VAT1LQ9HCJ6 419 aa17.3■□□□□ 0.36
LIMS4-201ENST00000413601 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.3■□□□□ 0.36
LIMS4-201ENST00000413601 WDR19Q8NEZ3 1342 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 DHX16O60231 1041 aaKnown RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 EVI5O60447 810 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 BAATQ14032 418 aaPredicted RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 COL9A3Q14050 684 aaPredicted RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 CDC37Q16543 378 aaPredicted RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 USH1GQ495M9 461 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 CLEC4DQ8WXI8 215 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 JMJD4Q9H9V9 463 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 MAD2L2Q9UI95 211 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 ZHX1Q9UKY1 873 aaPredicted RBP17.29■□□□□ 0.36
LIMS4-201ENST00000413601 PNMA2Q9UL42 364 aa17.29■□□□□ 0.36
LIMS4-201ENST00000413601 ASTN1O14525 1302 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 PTPDC1A2A3K4 754 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 PALM3A6NDB9 673 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-201ENST00000413601 KLRF2D3W0D1 207 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 DNM1LO00429 736 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 PRC1O43663 620 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 RARBP10826 455 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 AKR1A1P14550 325 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 ACVR2BQ13705 512 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 ARRDC4Q8NCT1 418 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 LENG1Q96BZ8 264 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-201ENST00000413601 SENP6Q9GZR1 1112 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-201ENST00000413601 ABHD16BQ9H3Z7 469 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 XPNPEP3Q9NQH7 507 aa17.28■□□□□ 0.36
LIMS4-201ENST00000413601 GPHNQ9NQX3 736 aaPredicted RBP17.28■□□□□ 0.36
LIMS4-201ENST00000413601 DDX49Q9Y6V7 483 aaKnown RBP17.28■□□□□ 0.36
LIMS4-201ENST00000413601 MCM5P33992 734 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 TROAPQ12815 778 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 GRM4Q14833 912 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 QRICH1Q2TAL8 776 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 ERICH6BQ5W0A0 696 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 LY9Q9HBG7 655 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 FAM184BQ9ULE4 1060 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 NR2E3Q9Y5X4 410 aa17.27■□□□□ 0.36
LIMS4-201ENST00000413601 ASB14A6NK59 587 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 KBTBD13C9JR72 458 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 PGK1P00558 417 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 CALML3P27482 149 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 LRRC41Q15345 812 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 CCDC144BQ3MJ40 725 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 RNF20Q5VTR2 975 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 SLC30A10Q6XR72 485 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 RNF207Q6ZRF8 634 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 CATIPQ7Z7H3 387 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 C7orf61Q8IZ16 206 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 KATNBL1Q9H079 304 aa17.26■□□□□ 0.35
LIMS4-201ENST00000413601 ADCY6O43306 1168 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 RPS6P62753 249 aaKnown RBP17.25■□□□□ 0.35
LIMS4-201ENST00000413601 LRRC26Q2I0M4 334 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 FBXO11Q86XK2 927 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 NUP133Q8WUM0 1156 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 MTA3Q9BTC8 594 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 MYL10Q9BUA6 226 aa17.25■□□□□ 0.35
LIMS4-201ENST00000413601 ABCB11O95342 1321 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 KIAA1217Q5T5P2 1943 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 SH2B2O14492 632 aaPredicted RBP17.24■□□□□ 0.35
LIMS4-201ENST00000413601 ALDH5A1P51649 535 aaPredicted RBP17.24■□□□□ 0.35
LIMS4-201ENST00000413601 ATN1P54259 1190 aaPredicted RBP17.24■□□□□ 0.35
LIMS4-201ENST00000413601 SLC35G1Q2M3R5 365 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 RASEFQ8IZ41 740 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 ZNF654Q8IZM8 581 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 TBC1D5Q92609 795 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 TMEM87BQ96K49 555 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 LRRC2Q9BYS8 371 aa17.24■□□□□ 0.35
LIMS4-201ENST00000413601 ADD3Q9UEY8 706 aaKnown RBP17.24■□□□□ 0.35
LIMS4-201ENST00000413601 SYNRGQ9UMZ2 1314 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 DUSP11O75319 330 aaKnown RBP17.23■□□□□ 0.35
LIMS4-201ENST00000413601 ADCYAP1R1P41586 468 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 EEPD1Q7L9B9 569 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 RNF180Q86T96 592 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 TMTC2Q8N394 836 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 RGS22Q8NE09 1264 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 FERMT2Q96AC1 680 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 MTMR8Q96EF0 704 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 NEK1Q96PY6 1258 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 RIOX1Q9H6W3 641 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 CEP290O15078 2479 aa17.23■□□□□ 0.35
LIMS4-201ENST00000413601 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 CCDC69A6NI79 296 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 ZBTB5O15062 677 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 CYTH3O43739 400 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 PPP1R11O60927 126 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 ADAMTS4O75173 837 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 IRX5P78411 483 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 ADCK5Q3MIX3 580 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 TSGA10IPQ3SY00 556 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 HOMER1Q86YM7 354 aa17.22■□□□□ 0.35
LIMS4-201ENST00000413601 FBXO16Q8IX29 292 aaPredicted RBP17.22■□□□□ 0.35
LIMS4-201ENST00000413601 MORC4Q8TE76 937 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms