RNA–Protein interactions for RNA: ENST00000413002.5

SSB-203, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 674 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-203ENST00000413002 MNX1P50219 401 aaPredicted RBP15.33■□□□□ 0.04
SSB-203ENST00000413002 TROAPQ12815 778 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 BAATQ14032 418 aaPredicted RBP15.33■□□□□ 0.04
SSB-203ENST00000413002 GRM4Q14833 912 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 QRICH1Q2TAL8 776 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 NFXL1Q6ZNB6 911 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.33■□□□□ 0.04
SSB-203ENST00000413002 CATIPQ7Z7H3 387 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 CLEC4DQ8WXI8 215 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 PIBF1Q8WXW3 757 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 LENG1Q96BZ8 264 aaPredicted RBP15.33■□□□□ 0.04
SSB-203ENST00000413002 NEK1Q96PY6 1258 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 CYP39A1Q9NYL5 469 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 OGDHLQ9ULD0 1010 aa15.33■□□□□ 0.04
SSB-203ENST00000413002 PTPDC1A2A3K4 754 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 PALM3A6NDB9 673 aaPredicted RBP15.32■□□□□ 0.04
SSB-203ENST00000413002 SLC30A10Q6XR72 485 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 CCDC144CPQ8IYA2 1237 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 FAM133AQ8N9E0 248 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 TBC1D5Q92609 795 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 ZHX1Q9UKY1 873 aaPredicted RBP15.32■□□□□ 0.04
SSB-203ENST00000413002 ZNFX1Q9P2E3 1918 aaKnown RBP15.32■□□□□ 0.04
SSB-203ENST00000413002 ASTN1O14525 1302 aa15.32■□□□□ 0.04
SSB-203ENST00000413002 ZNF865P0CJ78 1059 aaPredicted RBP15.31■□□□□ 0.04
SSB-203ENST00000413002 CALML3P27482 149 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 ARMCX2Q7L311 632 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 HOMER1Q86YM7 354 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 ZNF654Q8IZM8 581 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 DPF3Q92784 378 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.31■□□□□ 0.04
SSB-203ENST00000413002 CNPY2Q9Y2B0 182 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 SMCHD1A6NHR9 2005 aa15.31■□□□□ 0.04
SSB-203ENST00000413002 CCDC69A6NI79 296 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 PFASO15067 1338 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 SEPT4O43236 478 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 PPP1R11O60927 126 aaPredicted RBP15.3■□□□□ 0.04
SSB-203ENST00000413002 HSPA4P34932 840 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 GJC2Q5T442 439 aaPredicted RBP15.3■□□□□ 0.04
SSB-203ENST00000413002 MAMDC4Q6UXC1 1216 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 EEPD1Q7L9B9 569 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 CMTR1Q8N1G2 835 aaKnown RBP15.3■□□□□ 0.04
SSB-203ENST00000413002 WDR19Q8NEZ3 1342 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 TMEM87BQ96K49 555 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 PIGSQ96S52 555 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 SNX14Q9Y5W7 946 aa15.3■□□□□ 0.04
SSB-203ENST00000413002 PDE4DIPQ5VU43 2346 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 SYNGAP1Q96PV0 1343 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 CYTH3O43739 400 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 REC8O95072 547 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 RPS6P62753 249 aaKnown RBP15.29■□□□□ 0.04
SSB-203ENST00000413002 EXOSC10Q01780 885 aaKnown RBP15.29■□□□□ 0.04
SSB-203ENST00000413002 TSGA10IPQ3SY00 556 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 RNF207Q6ZRF8 634 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 NECAB2Q7Z6G3 386 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 ZNF467Q7Z7K2 595 aaPredicted RBP15.29■□□□□ 0.04
SSB-203ENST00000413002 FBXO11Q86XK2 927 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 JAKMIP1Q96N16 626 aaKnown RBP15.29■□□□□ 0.04
SSB-203ENST00000413002 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
SSB-203ENST00000413002 ZBTB5O15062 677 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 ADCY6O43306 1168 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 MSCO60682 206 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 PLEKHA8P1O95397 391 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 PGK1P00558 417 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 PTGS1P23219 599 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 IRX5P78411 483 aaPredicted RBP15.28■□□□□ 0.04
SSB-203ENST00000413002 ACVR2BQ13705 512 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 DHX32Q7L7V1 743 aaKnown RBP15.28■□□□□ 0.04
SSB-203ENST00000413002 CCDC82Q8N4S0 544 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 MSL3Q8N5Y2 521 aaKnown RBP15.28■□□□□ 0.04
SSB-203ENST00000413002 ANKLE1Q8NAG6 615 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 KCNB2Q92953 911 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 C11orf49Q9H6J7 331 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 RIOX1Q9H6W3 641 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 BRPF3Q9ULD4 1205 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 SLC12A7Q9Y666 1083 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 PLXNA1Q9UIW2 1896 aa15.28■□□□□ 0.04
SSB-203ENST00000413002 ABCB11O95342 1321 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 hCG_1642624A0A1W2PR95 340 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 DDAH1O94760 285 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 LIFRP42702 1097 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 KRT32Q14532 448 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 CCDC144BQ3MJ40 725 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 TMEM63BQ5T3F8 832 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 MICU3Q86XE3 530 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 TMTC2Q8N394 836 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 CTCFLQ8NI51 663 aaPredicted RBP15.27■□□□□ 0.04
SSB-203ENST00000413002 MTMR8Q96EF0 704 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 MTA3Q9BTC8 594 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 AMNQ9BXJ7 453 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 USP26Q9BXU7 913 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 KATNBL1Q9H079 304 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 PDGFCQ9NRA1 345 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 NRBP1Q9UHY1 535 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 PNMA2Q9UL42 364 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 PCDHA1Q9Y5I3 950 aa15.27■□□□□ 0.04
SSB-203ENST00000413002 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.26■□□□□ 0.03
SSB-203ENST00000413002 ASB14A6NK59 587 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 OPLAHO14841 1288 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 RARBP10826 455 aa15.26■□□□□ 0.03
SSB-203ENST00000413002 AKR1A1P14550 325 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms