RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 NSMFQ6X4W1 530 aa20.74■□□□□ 0.91
LSM5-204ENST00000409909 CLEC4DQ8WXI8 215 aa20.74■□□□□ 0.91
LSM5-204ENST00000409909 FERMT2Q96AC1 680 aa20.74■□□□□ 0.91
LSM5-204ENST00000409909 LCTP09848 1927 aa20.74■□□□□ 0.91
LSM5-204ENST00000409909 E7EWF7 191 aa20.73■□□□□ 0.91
LSM5-204ENST00000409909 ADAMTS4O75173 837 aa20.73■□□□□ 0.91
LSM5-204ENST00000409909 BAATQ14032 418 aaPredicted RBP20.73■□□□□ 0.91
LSM5-204ENST00000409909 CCDC144BQ3MJ40 725 aa20.73■□□□□ 0.91
LSM5-204ENST00000409909 SLC39A5Q6ZMH5 540 aa20.73■□□□□ 0.91
LSM5-204ENST00000409909 STOX1Q6ZVD7 989 aa20.73■□□□□ 0.91
LSM5-204ENST00000409909 FXR1P51114 621 aaKnown RBP eCLIP20.72■□□□□ 0.91
LSM5-204ENST00000409909 TRDNQ13061 729 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 IFIT1BQ5T764 474 aaKnown RBP20.72■□□□□ 0.91
LSM5-204ENST00000409909 RNF180Q86T96 592 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 ADGRF4Q8IZF3 695 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 GDF15Q99988 308 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 PHF24Q9UPV7 400 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 RBM8AQ9Y5S9 174 aaKnown RBP20.72■□□□□ 0.91
LSM5-204ENST00000409909 SYNRGQ9UMZ2 1314 aa20.72■□□□□ 0.91
LSM5-204ENST00000409909 ASB14A6NK59 587 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 DUSP11O75319 330 aaKnown RBP20.71■□□□□ 0.91
LSM5-204ENST00000409909 RTP1P59025 263 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 IRX5P78411 483 aaPredicted RBP20.71■□□□□ 0.91
LSM5-204ENST00000409909 ASPRV1Q53RT3 343 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 ESYT1Q9BSJ8 1104 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 LSG1Q9H089 658 aaKnown RBP20.71■□□□□ 0.91
LSM5-204ENST00000409909 SENP2Q9HC62 589 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 WDR19Q8NEZ3 1342 aa20.71■□□□□ 0.91
LSM5-204ENST00000409909 PARP1P09874 1014 aaKnown RBP20.7■□□□□ 0.9
LSM5-204ENST00000409909 MAGEA10P43363 369 aaPredicted RBP20.7■□□□□ 0.9
LSM5-204ENST00000409909 BMP2KLQ5H9B9 411 aa20.7■□□□□ 0.9
LSM5-204ENST00000409909 CHST3Q7LGC8 479 aa20.7■□□□□ 0.9
LSM5-204ENST00000409909 STAG2Q8N3U4 1231 aa20.7■□□□□ 0.9
LSM5-204ENST00000409909 KLHDC9Q8NEP7 349 aa20.7■□□□□ 0.9
LSM5-204ENST00000409909 PNMA2Q9UL42 364 aa20.7■□□□□ 0.9
LSM5-204ENST00000409909 LAMA2P24043 3122 aaKnown RBP20.69■□□□□ 0.9
LSM5-204ENST00000409909 PTPDC1A2A3K4 754 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 MYADML2A6NDP7 307 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 SNX17Q15036 470 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 CDC37Q16543 378 aaPredicted RBP20.69■□□□□ 0.9
LSM5-204ENST00000409909 USH1GQ495M9 461 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 CCSAPQ6IQ19 270 aaPredicted RBP20.69■□□□□ 0.9
LSM5-204ENST00000409909 SLC30A10Q6XR72 485 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 NCOA7Q8NI08 942 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 MORC4Q8TE76 937 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 JMJD4Q9H9V9 463 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 ATP11BQ9Y2G3 1177 aa20.69■□□□□ 0.9
LSM5-204ENST00000409909 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 A0A1W2PQ45 241 aaPredicted RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 A0A1W2PQY0 241 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 IFIT3O14879 490 aaKnown RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 BMP8BP34820 402 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 ANTXR2P58335 489 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 TRIM60Q495X7 471 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 RNF207Q6ZRF8 634 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 KIAA1211Q6ZU35 1233 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 RALYLQ86SE5 291 aaKnown RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 TSEN34Q9BSV6 310 aaKnown RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 UPF3AQ9H1J1 476 aaKnown RBP20.68■□□□□ 0.9
LSM5-204ENST00000409909 VAT1LQ9HCJ6 419 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 PDGFCQ9NRA1 345 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 MAD2L2Q9UI95 211 aa20.68■□□□□ 0.9
LSM5-204ENST00000409909 LRRC37A2A6NM11 1700 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 CTAGE5O15320 804 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 CALML3P27482 149 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 ALDH5A1P51649 535 aaPredicted RBP20.67■□□□□ 0.9
LSM5-204ENST00000409909 ACLYP53396 1101 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 GJA9P57773 515 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 RPS6P62753 249 aaKnown RBP20.67■□□□□ 0.9
LSM5-204ENST00000409909 KCNA10Q16322 511 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 QRICH1Q2TAL8 776 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 C1orf53Q5VUE5 145 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 TAPT1Q6NXT6 567 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 EEPD1Q7L9B9 569 aa20.67■□□□□ 0.9
LSM5-204ENST00000409909 MB21D2Q8IYB1 491 aaPredicted RBP20.67■□□□□ 0.9
LSM5-204ENST00000409909 PALM3A6NDB9 673 aaPredicted RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 KLRF2D3W0D1 207 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 C6orf222P0C671 652 aaPredicted RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 PTGS1P23219 599 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 CST5P28325 142 aaPredicted RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 TNFAIP2Q03169 654 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 COL9A3Q14050 684 aaPredicted RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 SLC35G1Q2M3R5 365 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 TMEM63BQ5T3F8 832 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 FBXO16Q8IX29 292 aaPredicted RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 RGS22Q8NE09 1264 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 IGDCC4Q8TDY8 1250 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 TBC1D5Q92609 795 aa20.66■□□□□ 0.9
LSM5-204ENST00000409909 ADD3Q9UEY8 706 aaKnown RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 GNEQ9Y223 722 aaKnown RBP20.66■□□□□ 0.9
LSM5-204ENST00000409909 A0A1W2PPC1 479 aa20.65■□□□□ 0.9
LSM5-204ENST00000409909 DHX16O60231 1041 aaKnown RBP20.65■□□□□ 0.9
LSM5-204ENST00000409909 SMPD1P17405 629 aa20.65■□□□□ 0.9
LSM5-204ENST00000409909 MDM2Q00987 491 aaPredicted RBP20.65■□□□□ 0.9
LSM5-204ENST00000409909 WTAPQ15007 396 aa20.65■□□□□ 0.9
LSM5-204ENST00000409909 NECTIN1Q15223 517 aa20.65■□□□□ 0.9
LSM5-204ENST00000409909 CCDC136Q96JN2 1154 aa20.65■□□□□ 0.9
LSM5-204ENST00000409909 ABCB11O95342 1321 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 ERICH2A1L162 156 aa20.64■□□□□ 0.89
LSM5-204ENST00000409909 MOXD2PA6NHM9 499 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms