RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 SNX17Q15036 470 aa18.58■□□□□ 0.56
ATG4B-203ENST00000400772 NSMFQ6X4W1 530 aa18.58■□□□□ 0.56
ATG4B-203ENST00000400772 CENPQQ7L2Z9 268 aaPredicted RBP18.58■□□□□ 0.56
ATG4B-203ENST00000400772 KLHDC9Q8NEP7 349 aa18.58■□□□□ 0.56
ATG4B-203ENST00000400772 FERMT2Q96AC1 680 aa18.58■□□□□ 0.56
ATG4B-203ENST00000400772 SYNRGQ9UMZ2 1314 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 DNAH12Q6ZR08 3092 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 MYADML2A6NDP7 307 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 DUSP11O75319 330 aaKnown RBP18.57■□□□□ 0.56
ATG4B-203ENST00000400772 BMP8BP34820 402 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 MAGEA10P43363 369 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-203ENST00000400772 RTP1P59025 263 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 IRX5P78411 483 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-203ENST00000400772 BAATQ14032 418 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-203ENST00000400772 CCDC144BQ3MJ40 725 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 CCSAPQ6IQ19 270 aaPredicted RBP18.57■□□□□ 0.56
ATG4B-203ENST00000400772 STOX1Q6ZVD7 989 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 RNF180Q86T96 592 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 UBAC1Q9BSL1 405 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 LCTP09848 1927 aa18.57■□□□□ 0.56
ATG4B-203ENST00000400772 TRIOBPQ9H2D6 2365 aa18.56■□□□□ 0.56
ATG4B-203ENST00000400772 WDR19Q8NEZ3 1342 aa18.56■□□□□ 0.56
ATG4B-203ENST00000400772 ASB14A6NK59 587 aa18.56■□□□□ 0.56
ATG4B-203ENST00000400772 E7EWF7 191 aa18.56■□□□□ 0.56
ATG4B-203ENST00000400772 IFIT1BQ5T764 474 aaKnown RBP18.56■□□□□ 0.56
ATG4B-203ENST00000400772 ADGRF4Q8IZF3 695 aa18.56■□□□□ 0.56
ATG4B-203ENST00000400772 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-203ENST00000400772 ASPRV1Q53RT3 343 aa18.55■□□□□ 0.56
ATG4B-203ENST00000400772 C1orf53Q5VUE5 145 aa18.55■□□□□ 0.56
ATG4B-203ENST00000400772 MORC4Q8TE76 937 aa18.55■□□□□ 0.56
ATG4B-203ENST00000400772 TSEN34Q9BSV6 310 aaKnown RBP18.55■□□□□ 0.56
ATG4B-203ENST00000400772 LSG1Q9H089 658 aaKnown RBP18.55■□□□□ 0.56
ATG4B-203ENST00000400772 SENP2Q9HC62 589 aa18.55■□□□□ 0.56
ATG4B-203ENST00000400772 PNMA2Q9UL42 364 aa18.55■□□□□ 0.56
ATG4B-203ENST00000400772 RBM8AQ9Y5S9 174 aaKnown RBP18.55■□□□□ 0.56
ATG4B-203ENST00000400772 A0A1W2PQ45 241 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-203ENST00000400772 A0A1W2PQY0 241 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 CTAGE5O15320 804 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 PARP1P09874 1014 aaKnown RBP18.54■□□□□ 0.56
ATG4B-203ENST00000400772 TRDNQ13061 729 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 KCNA10Q16322 511 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 CDC37Q16543 378 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-203ENST00000400772 TRIM60Q495X7 471 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 TAPT1Q6NXT6 567 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 SLC30A10Q6XR72 485 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 CHST3Q7LGC8 479 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 STAG2Q8N3U4 1231 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 ESYT1Q9BSJ8 1104 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 UPF3AQ9H1J1 476 aaKnown RBP18.54■□□□□ 0.56
ATG4B-203ENST00000400772 JMJD4Q9H9V9 463 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 PDGFCQ9NRA1 345 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 GNEQ9Y223 722 aaKnown RBP18.54■□□□□ 0.56
ATG4B-203ENST00000400772 ATP11BQ9Y2G3 1177 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 SZT2Q5T011 3432 aa18.54■□□□□ 0.56
ATG4B-203ENST00000400772 A0A1W2PPC1 479 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 PTPDC1A2A3K4 754 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 PTGS1P23219 599 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 CST5P28325 142 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-203ENST00000400772 GJA9P57773 515 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 USH1GQ495M9 461 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 BMP2KLQ5H9B9 411 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 RNF207Q6ZRF8 634 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 EEPD1Q7L9B9 569 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 NCOA7Q8NI08 942 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 MAD2L2Q9UI95 211 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 LAMA3Q16787 3333 aa18.53■□□□□ 0.56
ATG4B-203ENST00000400772 PALM3A6NDB9 673 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 SMPD1P17405 629 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 CALML3P27482 149 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 ALDH5A1P51649 535 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 ACLYP53396 1101 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 ANTXR2P58335 489 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 RPS6P62753 249 aaKnown RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 NKX3-2P78367 333 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 MDM2Q00987 491 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 TNFAIP2Q03169 654 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 TMEM63BQ5T3F8 832 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 FBXO16Q8IX29 292 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 MB21D2Q8IYB1 491 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-203ENST00000400772 RGS22Q8NE09 1264 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 TBC1D5Q92609 795 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 VAT1LQ9HCJ6 419 aa18.52■□□□□ 0.56
ATG4B-203ENST00000400772 MOXD2PA6NHM9 499 aa18.51■□□□□ 0.55
ATG4B-203ENST00000400772 IFIT3O14879 490 aaKnown RBP18.51■□□□□ 0.55
ATG4B-203ENST00000400772 C6orf222P0C671 652 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-203ENST00000400772 COL9A3Q14050 684 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-203ENST00000400772 SLC35G1Q2M3R5 365 aa18.51■□□□□ 0.55
ATG4B-203ENST00000400772 SH3RF1Q7Z6J0 888 aa18.51■□□□□ 0.55
ATG4B-203ENST00000400772 RALYLQ86SE5 291 aaKnown RBP18.51■□□□□ 0.55
ATG4B-203ENST00000400772 IGDCC4Q8TDY8 1250 aa18.51■□□□□ 0.55
ATG4B-203ENST00000400772 ADD3Q9UEY8 706 aaKnown RBP18.51■□□□□ 0.55
ATG4B-203ENST00000400772 LRRC37A2A6NM11 1700 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 LOC102724159A0A0B4J2E5 919 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 TRIM43BA6NCK2 446 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 SOX1O00570 391 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-203ENST00000400772 ASGR1P07306 291 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 TLE2Q04725 743 aa18.5■□□□□ 0.55
ATG4B-203ENST00000400772 PWP2Q15269 919 aaKnown RBP18.5■□□□□ 0.55
ATG4B-203ENST00000400772 IQSEC1Q6DN90 963 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms