RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 NR1I3Q14994 352 aa28.2■■■□□ 2.1
NDEL1-202ENST00000380025 SEPT2Q15019 361 aa28.2■■■□□ 2.1
NDEL1-202ENST00000380025 ENTPD3O75355 529 aa28.19■■■□□ 2.1
NDEL1-202ENST00000380025 CLK2P49760 499 aaKnown RBP28.19■■■□□ 2.1
NDEL1-202ENST00000380025 E4F1Q66K89 784 aaPredicted RBP28.19■■■□□ 2.1
NDEL1-202ENST00000380025 NYAP1Q6ZVC0 841 aa28.19■■■□□ 2.1
NDEL1-202ENST00000380025 MTMR9Q96QG7 549 aa28.19■■■□□ 2.1
NDEL1-202ENST00000380025 DYNC1I1O14576 645 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 PLCG1P19174 1290 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 TECP42680 631 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 IGSF22Q8N9C0 903 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 DCAF4Q8WV16 495 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 TMX1Q9H3N1 280 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 TRMT1Q9NXH9 659 aaKnown RBP28.18■■■□□ 2.1
NDEL1-202ENST00000380025 COL2A1P02458 1487 aaPredicted RBP28.18■■■□□ 2.1
NDEL1-202ENST00000380025 MYL1P05976 194 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 GTF2F1P35269 517 aaKnown RBP eCLIP28.18■■■□□ 2.1
NDEL1-202ENST00000380025 UBE2SQ16763 222 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 TMEM179Q6ZVK1 233 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 CUEDC2Q9H467 287 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 RWDD2AQ9UIY3 292 aa28.18■■■□□ 2.1
NDEL1-202ENST00000380025 SLC37A4O43826 429 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 NRDCO43847 1150 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 ICA1Q05084 483 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 SLFN13Q68D06 897 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 SPECC1LQ69YQ0 1117 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 TTLL6Q8N841 843 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 GDAQ9Y2T3 454 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 KLRC4O43908 158 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 GDF11O95390 407 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 TDP2O95551 362 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 SLC1A4P43007 532 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 GOLGA8FQ08AF8 430 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 GOLGA8DPQ0D2H9 430 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 CCDC112Q8NEF3 446 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 CUL5Q93034 780 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 MMTAG2Q9BU76 263 aaKnown RBP28.17■■■□□ 2.1
NDEL1-202ENST00000380025 MAGEF1Q9HAY2 307 aa28.17■■■□□ 2.1
NDEL1-202ENST00000380025 RAD21O60216 631 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 PAK1Q13153 545 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 KCNB1Q14721 858 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 CALCRLQ16602 461 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 ABCB5Q2M3G0 1257 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 CCDC93Q567U6 631 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 RIOK3O14730 519 aaKnown RBP28.16■■■□□ 2.1
NDEL1-202ENST00000380025 COBLO75128 1261 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 TNNI2P48788 182 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 GRIPAP1Q4V328 841 aa28.16■■■□□ 2.1
NDEL1-202ENST00000380025 TXKP42681 527 aa28.15■■■□□ 2.1
NDEL1-202ENST00000380025 PRCPP42785 496 aa28.15■■■□□ 2.1
NDEL1-202ENST00000380025 MYH7BA7E2Y1 1941 aa28.15■■■□□ 2.1
NDEL1-202ENST00000380025 COL4A5P29400 1685 aa28.15■■■□□ 2.1
NDEL1-202ENST00000380025 PSDA5PKW4 1024 aaPredicted RBP28.14■■■□□ 2.1
NDEL1-202ENST00000380025 MRPL12P52815 198 aaKnown RBP28.14■■■□□ 2.1
NDEL1-202ENST00000380025 PTPN14Q15678 1187 aa28.14■■■□□ 2.1
NDEL1-202ENST00000380025 QRICH1Q2TAL8 776 aa28.14■■■□□ 2.1
NDEL1-202ENST00000380025 KMT5BQ4FZB7 885 aa28.14■■■□□ 2.1
NDEL1-202ENST00000380025 NELFBQ8WX92 580 aa28.14■■■□□ 2.1
NDEL1-202ENST00000380025 PSMD1Q99460 953 aa28.14■■■□□ 2.1
NDEL1-202ENST00000380025 ADD3Q9UEY8 706 aaKnown RBP28.14■■■□□ 2.1
NDEL1-202ENST00000380025 FXR2P51116 673 aaKnown RBP eCLIP28.14■■■□□ 2.09
NDEL1-202ENST00000380025 JAG1P78504 1218 aa28.14■■■□□ 2.09
NDEL1-202ENST00000380025 RSBN1LQ6PCB5 846 aaPredicted RBP28.14■■■□□ 2.09
NDEL1-202ENST00000380025 RTKN2Q8IZC4 609 aa28.14■■■□□ 2.09
NDEL1-202ENST00000380025 PSTPIP2Q9H939 334 aa28.14■■■□□ 2.09
NDEL1-202ENST00000380025 TEX33O43247 280 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 CEP135Q66GS9 1140 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 TMEM139Q8IV31 216 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 RHOBTB3O94955 611 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 PPP4R3AQ6IN85 833 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 ADSSL1Q8N142 457 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 GMCL1P1Q8NEA9 526 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 CTAGE1Q96RT6 745 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 CSRNP1Q96S65 589 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 MAPK8IP1Q9UQF2 711 aa28.13■■■□□ 2.09
NDEL1-202ENST00000380025 KCNA3P22001 575 aa28.12■■■□□ 2.09
NDEL1-202ENST00000380025 SEMA3FQ13275 785 aa28.12■■■□□ 2.09
NDEL1-202ENST00000380025 RRP1BQ14684 758 aaKnown RBP28.12■■■□□ 2.09
NDEL1-202ENST00000380025 CDC37Q16543 378 aaPredicted RBP28.12■■■□□ 2.09
NDEL1-202ENST00000380025 PPP1R13BQ96KQ4 1090 aa28.12■■■□□ 2.09
NDEL1-202ENST00000380025 ATF5Q9Y2D1 282 aaPredicted RBP28.12■■■□□ 2.09
NDEL1-202ENST00000380025 SPDYE2BA6NHP3 402 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 F5H6K3 240 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 SPDYE6P0CI01 402 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 KLRC3Q07444 240 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 TC2NQ8N9U0 490 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 GMLQ99445 158 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 PSMD14O00487 310 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 RAD17O75943 681 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 GH2P01242 217 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 PBX1P40424 430 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 TRIM9Q9C026 710 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 LRWD1Q9UFC0 647 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 PAXBP1Q9Y5B6 917 aa28.11■■■□□ 2.09
NDEL1-202ENST00000380025 VIL1P09327 827 aaKnown RBP28.1■■■□□ 2.09
NDEL1-202ENST00000380025 DPEP1P16444 411 aa28.1■■■□□ 2.09
NDEL1-202ENST00000380025 CALML4Q96GE6 196 aa28.1■■■□□ 2.09
NDEL1-202ENST00000380025 GMCL1Q96IK5 515 aa28.1■■■□□ 2.09
NDEL1-202ENST00000380025 ZNF277Q9NRM2 450 aaPredicted RBP28.1■■■□□ 2.09
NDEL1-202ENST00000380025 LIMA1Q9UHB6 759 aaKnown RBP28.1■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms