RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 PURBQ96QR8 312 aaKnown RBP22.15■■□□□ 1.14
CKS1B-203ENST00000368439 MAD2L2Q9UI95 211 aa22.15■■□□□ 1.14
CKS1B-203ENST00000368439 PNMA2Q9UL42 364 aa22.15■■□□□ 1.14
CKS1B-203ENST00000368439 NR2E3Q9Y5X4 410 aa22.15■■□□□ 1.14
CKS1B-203ENST00000368439 BAATQ14032 418 aaPredicted RBP22.14■■□□□ 1.13
CKS1B-203ENST00000368439 CDC37Q16543 378 aaPredicted RBP22.14■■□□□ 1.13
CKS1B-203ENST00000368439 LRRC26Q2I0M4 334 aa22.14■■□□□ 1.13
CKS1B-203ENST00000368439 CREB3L3Q68CJ9 461 aa22.14■■□□□ 1.13
CKS1B-203ENST00000368439 LENG1Q96BZ8 264 aaPredicted RBP22.14■■□□□ 1.13
CKS1B-203ENST00000368439 ABHD16BQ9H3Z7 469 aa22.14■■□□□ 1.13
CKS1B-203ENST00000368439 JMJD4Q9H9V9 463 aa22.14■■□□□ 1.13
CKS1B-203ENST00000368439 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
CKS1B-203ENST00000368439 PALM3A6NDB9 673 aaPredicted RBP22.13■■□□□ 1.13
CKS1B-203ENST00000368439 ADCY6O43306 1168 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 CDC45O75419 566 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 NEFLP07196 543 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 RARBP10826 455 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 MORC4Q8TE76 937 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 SENP6Q9GZR1 1112 aaPredicted RBP22.13■■□□□ 1.13
CKS1B-203ENST00000368439 XPNPEP3Q9NQH7 507 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 ZHX1Q9UKY1 873 aaPredicted RBP22.13■■□□□ 1.13
CKS1B-203ENST00000368439 FAM184BQ9ULE4 1060 aa22.13■■□□□ 1.13
CKS1B-203ENST00000368439 DDX49Q9Y6V7 483 aaKnown RBP22.13■■□□□ 1.13
CKS1B-203ENST00000368439 ASB14A6NK59 587 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 ADAMTS4O75173 837 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 TROAPQ12815 778 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 GRM4Q14833 912 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 WTAPQ15007 396 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 SLC35G1Q2M3R5 365 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 SLC30A10Q6XR72 485 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 C7orf61Q8IZ16 206 aa22.12■■□□□ 1.13
CKS1B-203ENST00000368439 COLQQ9Y215 455 aaPredicted RBP22.12■■□□□ 1.13
CKS1B-203ENST00000368439 BAZ2BQ9UIF8 2168 aaKnown RBP22.11■■□□□ 1.13
CKS1B-203ENST00000368439 ERICH2A1L162 156 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 KLRF2D3W0D1 207 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 PGK1P00558 417 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 QRICH1Q2TAL8 776 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 CCDC144BQ3MJ40 725 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 MTMR8Q96EF0 704 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 MTA3Q9BTC8 594 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 PRO3102Q9H379 93 aa22.11■■□□□ 1.13
CKS1B-203ENST00000368439 GPHNQ9NQX3 736 aaPredicted RBP22.11■■□□□ 1.13
CKS1B-203ENST00000368439 RANBP2P49792 3224 aaKnown RBP22.11■■□□□ 1.13
CKS1B-203ENST00000368439 SYNRGQ9UMZ2 1314 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 KBTBD13C9JR72 458 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 SART3Q15020 963 aaKnown RBP22.1■■□□□ 1.13
CKS1B-203ENST00000368439 USH1GQ495M9 461 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 TMEM67Q5HYA8 995 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 RNF207Q6ZRF8 634 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 RGS22Q8NE09 1264 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 LY9Q9HBG7 655 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 VAT1LQ9HCJ6 419 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 PHF24Q9UPV7 400 aa22.1■■□□□ 1.13
CKS1B-203ENST00000368439 PTPDC1A2A3K4 754 aa22.09■■□□□ 1.13
CKS1B-203ENST00000368439 PRC1O43663 620 aa22.09■■□□□ 1.13
CKS1B-203ENST00000368439 DUSP11O75319 330 aaKnown RBP22.09■■□□□ 1.13
CKS1B-203ENST00000368439 ALDH5A1P51649 535 aaPredicted RBP22.09■■□□□ 1.13
CKS1B-203ENST00000368439 RPS6P62753 249 aaKnown RBP22.09■■□□□ 1.13
CKS1B-203ENST00000368439 KLHDC9Q8NEP7 349 aa22.09■■□□□ 1.13
CKS1B-203ENST00000368439 ABCB11O95342 1321 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 ADCYAP1R1P41586 468 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 HABP4Q5JVS0 413 aaKnown RBP22.08■■□□□ 1.13
CKS1B-203ENST00000368439 CCSAPQ6IQ19 270 aaPredicted RBP22.08■■□□□ 1.13
CKS1B-203ENST00000368439 TAPT1Q6NXT6 567 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 CHRDL2Q6WN34 429 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 RNF180Q86T96 592 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 TBC1D5Q92609 795 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 UPF3AQ9H1J1 476 aaKnown RBP22.08■■□□□ 1.13
CKS1B-203ENST00000368439 RIOX1Q9H6W3 641 aa22.08■■□□□ 1.13
CKS1B-203ENST00000368439 ADD3Q9UEY8 706 aaKnown RBP22.08■■□□□ 1.13
CKS1B-203ENST00000368439 LOC102724159A0A0B4J2E5 919 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 MYADML2A6NDP7 307 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 SH2B2O14492 632 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 CYTH3O43739 400 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 PPP1R11O60927 126 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 MYCNP04198 464 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 CALML3P27482 149 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 MCM5P33992 734 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 ATN1P54259 1190 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 IRX5P78411 483 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 SNX17Q15036 470 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 PWP2Q15269 919 aaKnown RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 CASC1Q6TDU7 716 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 SLC39A5Q6ZMH5 540 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 FBXO11Q86XK2 927 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 MAF1Q9H063 256 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 PDGFCQ9NRA1 345 aa22.07■■□□□ 1.12
CKS1B-203ENST00000368439 ZMYND8Q9ULU4 1186 aaPredicted RBP22.07■■□□□ 1.12
CKS1B-203ENST00000368439 CTAGE5O15320 804 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 DHX16O60231 1041 aaKnown RBP22.06■■□□□ 1.12
CKS1B-203ENST00000368439 CST5P28325 142 aaPredicted RBP22.06■■□□□ 1.12
CKS1B-203ENST00000368439 GJA9P57773 515 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 NKX3-2P78367 333 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 TSGA10IPQ3SY00 556 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 ERICH6BQ5W0A0 696 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 FBXO16Q8IX29 292 aaPredicted RBP22.06■■□□□ 1.12
CKS1B-203ENST00000368439 RASEFQ8IZ41 740 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 FERMT2Q96AC1 680 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 TMEM87BQ96K49 555 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms