RNA–Protein interactions for RNA: ENST00000359005.8

TRAPPC4-201, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 849 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-201ENST00000359005 FSIP1Q8NA03 581 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 GMCL1P1Q8NEA9 526 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 FERMT2Q96AC1 680 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 AIFM3Q96NN9 605 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 NAP1L4Q99733 375 aaKnown RBP12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 CLSTN2Q9H4D0 955 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 RIOX1Q9H6W3 641 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 DACT1Q9NYF0 836 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 KCNJ14Q9UNX9 436 aa12.28□□□□□ -0.44
TRAPPC4-201ENST00000359005 PNMA6FA0A0J9YX94 578 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 KIF28PB7ZC32 967 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 LAD1O00515 517 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 SLC1A4P43007 532 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZNF543Q08ER8 600 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 PKN2Q16513 984 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 UVSSAQ2YD98 709 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 KANK3Q6NY19 840 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 SCYL3Q8IZE3 742 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZNF579Q8NAF0 562 aaKnown RBP12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 CHAMP1Q96JM3 812 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 TIGD1Q96MW7 591 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZFYVE28Q9HCC9 887 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 PCDHA7Q9UN72 937 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 MTMR7Q9Y216 660 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 AFG3L2Q9Y4W6 797 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 CLIC4Q9Y696 253 aa12.27□□□□□ -0.45
TRAPPC4-201ENST00000359005 USP17L5A8MUK1 530 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 TLR2O60603 784 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 ASNSP08243 561 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 CYP2C8P10632 490 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 EEF2P13639 858 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 MRPL12P52815 198 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 USP17L2Q6R6M4 530 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 C17orf99Q6UX52 265 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 STAG2Q8N3U4 1231 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 GMCL1Q96IK5 515 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 SDF4Q9BRK5 362 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 NAT10Q9H0A0 1025 aaKnown RBP12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZMYND12Q9H0C1 365 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 DNAJC18Q9H819 358 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 CPA4Q9UI42 421 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 PNMA2Q9UL42 364 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 PTPN22Q9Y2R2 807 aa12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 GREB1LQ9C091 1923 aaPredicted RBP12.26□□□□□ -0.45
TRAPPC4-201ENST00000359005 PDHXO00330 501 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 CXCL11O14625 94 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 TXLNAP40222 546 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 TPRNQ4KMQ1 711 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 TTC38Q5R3I4 469 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 ARL6IP4Q66PJ3 421 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 SLFN13Q68D06 897 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 LRRC47Q8N1G4 583 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 PGBD1Q96JS3 809 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 EFCC1Q9HA90 598 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 GJB4Q9NTQ9 266 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 USP25Q9UHP3 1055 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 SRPRBQ9Y5M8 271 aaKnown RBP12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 ADGRA2Q96PE1 1338 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 OTOFQ9HC10 1997 aa12.25□□□□□ -0.45
TRAPPC4-201ENST00000359005 SMCO2A6NFE2 343 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 STXBP3O00186 592 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 ZBTB5O15062 677 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 CTNND1O60716 968 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 GH2P01242 217 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 MLLT1Q03111 559 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 IKQ13123 557 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 NONOQ15233 471 aaKnown RBP eCLIP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 ANKRD23Q86SG2 305 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 HOMER1Q86YM7 354 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 ELOA2Q8IYF1 753 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 REXO1Q8N1G1 1221 aaKnown RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 CHURC1Q8WUH1 139 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 CUL5Q93034 780 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 ERO1AQ96HE7 468 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 MYH4Q9Y623 1939 aa12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 TNRC18O15417 2968 aaPredicted RBP12.24□□□□□ -0.45
TRAPPC4-201ENST00000359005 A0A0G2JLL6 359 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 POTEFA5A3E0 1075 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 F5H6K3 240 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 RAD21O60216 631 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 NR1I2O75469 434 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 GOLGA8HP0CJ92 632 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 BMP3P12645 472 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 LIG1P18858 919 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PTPREP23469 700 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 SYKP43405 635 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 ADCY7P51828 1080 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 LACTBP83111 547 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 KLRC3Q07444 240 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 NR5A1Q13285 461 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 SEPT2Q15019 361 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PTPAQ15257 358 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 TREML2Q5T2D2 321 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 RESP18Q5W5W9 173 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 WWC2Q6AWC2 1192 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 RBM43Q6ZSC3 357 aaKnown RBP12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PRRT2Q7Z6L0 340 aaPredicted RBP12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PIBF1Q8WXW3 757 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 PIGSQ96S52 555 aa12.23□□□□□ -0.45
TRAPPC4-201ENST00000359005 VAT1LQ9HCJ6 419 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms