RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 SOX10P56693 466 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 CACNB2Q08289 660 aaPredicted RBP21.4■■□□□ 1.02
HLA-F-217ENST00000334668 MUM1L1Q5H9M0 696 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 MAML3Q96JK9 1138 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 TCEANC2Q96MN5 208 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 TMEM106CQ9BVX2 250 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 PAK6Q9NQU5 681 aaPredicted RBP21.4■■□□□ 1.02
HLA-F-217ENST00000334668 HOMER2Q9NSB8 354 aa21.4■■□□□ 1.02
HLA-F-217ENST00000334668 GJB1P08034 283 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 TAL1P17542 331 aaPredicted RBP21.39■■□□□ 1.01
HLA-F-217ENST00000334668 PSMA5P28066 241 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 CDC37Q16543 378 aaPredicted RBP21.39■■□□□ 1.01
HLA-F-217ENST00000334668 BLOC1S2Q6QNY1 142 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 NFXL1Q6ZNB6 911 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 MYL10Q9BUA6 226 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 AGXT2Q9BYV1 514 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 TM6SF1Q9BZW5 370 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 RNF208Q9H0X6 261 aa21.39■■□□□ 1.01
HLA-F-217ENST00000334668 A1CFQ9NQ94 594 aaKnown RBP21.39■■□□□ 1.01
HLA-F-217ENST00000334668 CYTH3O43739 400 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 MYCP01106 439 aaPredicted RBP21.38■■□□□ 1.01
HLA-F-217ENST00000334668 CALM1P0DP23 149 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 CALM2P0DP24 149 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 CALM3P0DP25 149 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 CPA1P15085 419 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 RPS6KB1P23443 525 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 SMARCA1P28370 1054 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 QRICH1Q2TAL8 776 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 MFSD14CQ5VZR4 134 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 APOA5Q6Q788 366 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 ANKRD35Q8N283 1001 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 NUP133Q8WUM0 1156 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 CLEC4DQ8WXI8 215 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 IL17RAQ96F46 866 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 DDX11Q96FC9 970 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 FGD4Q96M96 766 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 ZSWIM6Q9HCJ5 1215 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 SLC12A7Q9Y666 1083 aa21.38■■□□□ 1.01
HLA-F-217ENST00000334668 PFASO15067 1338 aa21.37■■□□□ 1.01
HLA-F-217ENST00000334668 KIF5BP33176 963 aa21.37■■□□□ 1.01
HLA-F-217ENST00000334668 ZNF467Q7Z7K2 595 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-217ENST00000334668 MSL3Q8N5Y2 521 aaKnown RBP21.37■■□□□ 1.01
HLA-F-217ENST00000334668 FAM133AQ8N9E0 248 aa21.37■■□□□ 1.01
HLA-F-217ENST00000334668 CTCFLQ8NI51 663 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-217ENST00000334668 MAF1Q9H063 256 aa21.37■■□□□ 1.01
HLA-F-217ENST00000334668 HMX1Q9NP08 348 aaPredicted RBP21.37■■□□□ 1.01
HLA-F-217ENST00000334668 BRPF3Q9ULD4 1205 aa21.37■■□□□ 1.01
HLA-F-217ENST00000334668 SEC24BO95487 1268 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 CASTP20810 708 aaKnown RBP21.36■■□□□ 1.01
HLA-F-217ENST00000334668 CYP2C19P33261 490 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 GJA8P48165 433 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 RCAN1P53805 252 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 C8orf34Q49A92 452 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 MAMDC4Q6UXC1 1216 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 FANCBQ8NB91 859 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 RGS22Q8NE09 1264 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 LZTS2Q9BRK4 669 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 SPZ1Q9BXG8 430 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.36■■□□□ 1.01
HLA-F-217ENST00000334668 VAT1LQ9HCJ6 419 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 CYP39A1Q9NYL5 469 aa21.36■■□□□ 1.01
HLA-F-217ENST00000334668 NFIBO00712 420 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 ZBTB5O15062 677 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 CYBAP13498 195 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 CAPN2P17655 700 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 GNAQP50148 359 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 ANAPC15P60006 121 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 RUFY3Q7L099 469 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 FBXO11Q86XK2 927 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 PHF12Q96QT6 1004 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 TINF2Q9BSI4 451 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 NRBP1Q9UHY1 535 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 PDE4DIPQ5VU43 2346 aa21.35■■□□□ 1.01
HLA-F-217ENST00000334668 FRMPD3Q5JV73 1810 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 ABCB11O95342 1321 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 SYNGAP1Q96PV0 1343 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 DHX16O60231 1041 aaKnown RBP21.34■■□□□ 1.01
HLA-F-217ENST00000334668 PPP1R11O60927 126 aaPredicted RBP21.34■■□□□ 1.01
HLA-F-217ENST00000334668 SGPL1O95470 568 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 EN2P19622 333 aaPredicted RBP21.34■■□□□ 1.01
HLA-F-217ENST00000334668 CNTN2Q02246 1040 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 Q6ZUG5 572 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 SRBD1Q8N5C6 995 aaKnown RBP21.34■■□□□ 1.01
HLA-F-217ENST00000334668 TRPV1Q8NER1 839 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 SHISA4Q96DD7 197 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 CRISPLD2Q9H0B8 497 aa21.34■■□□□ 1.01
HLA-F-217ENST00000334668 POTEB2H3BUK9 544 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 RXRAP19793 462 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 CCND3P30281 292 aaPredicted RBP21.33■■□□□ 1.01
HLA-F-217ENST00000334668 EVCP57679 992 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 USH1GQ495M9 461 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 SYNE3Q6ZMZ3 975 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 MICU3Q86XE3 530 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 U2AF1L4Q8WU68 220 aaKnown RBP21.33■■□□□ 1.01
HLA-F-217ENST00000334668 PIGSQ96S52 555 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 AMNQ9BXJ7 453 aa21.33■■□□□ 1.01
HLA-F-217ENST00000334668 TNRC18O15417 2968 aaPredicted RBP21.33■■□□□ 1
HLA-F-217ENST00000334668 ASTN1O14525 1302 aa21.32■■□□□ 1
HLA-F-217ENST00000334668 PNMA6FA0A0J9YX94 578 aa21.32■■□□□ 1
HLA-F-217ENST00000334668 SOWAHBA6NEL2 793 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms