RNA–Protein interactions for RNA: ENST00000321374.9

CCDC33-202, Transcript of coiled-coil domain containing 33, humanhuman

TSL 2

Gene CCDC33, Length 1,450 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-202ENST00000321374 PLCD1P51178 756 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
CCDC33-202ENST00000321374 RESTQ13127 1097 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 COG2Q14746 738 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 SNX17Q15036 470 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 TRIM60Q495X7 471 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 GIMAP6Q6P9H5 292 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 CYB5R4Q7L1T6 521 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 FERMT3Q86UX7 667 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 BADQ92934 168 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 TANGO6Q9C0B7 1094 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 SPATC1LQ9H0A9 340 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 SEMA6BQ9H3T3 888 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
CCDC33-202ENST00000321374 PDLIM7Q9NR12 457 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 SLC5A4Q9NY91 659 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 HOXC10Q9NYD6 342 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 BRPF3Q9ULD4 1205 aa13.59□□□□□ -0.23
CCDC33-202ENST00000321374 NEDD4P46934 1319 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 PARP14Q460N5 1801 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 MYH15Q9Y2K3 1946 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 PRKAB2O43741 272 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 DTNBO60941 627 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 PCP11498 1178 aaKnown RBP13.58□□□□□ -0.24
CCDC33-202ENST00000321374 ERCC3P19447 782 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 LIFRP42702 1097 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 CTDSPL2Q05D32 466 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 SEPT2Q15019 361 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 TMEM67Q5HYA8 995 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 CCDC183Q5T5S1 534 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 ATL3Q6DD88 541 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 LRSAM1Q6UWE0 723 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 SYNE3Q6ZMZ3 975 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 NFXL1Q6ZNB6 911 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 GAS2L3Q86XJ1 694 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 SHCBP1Q8NEM2 672 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 RIOK1Q9BRS2 568 aaKnown RBP13.58□□□□□ -0.24
CCDC33-202ENST00000321374 ANAPC4Q9UJX5 808 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 CFAP45Q9UL16 551 aa13.58□□□□□ -0.24
CCDC33-202ENST00000321374 ERICH2A1L162 156 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 MPHOSPH10O00566 681 aaKnown RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 IFIT3O14879 490 aaKnown RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 POLR3DP05423 398 aaPredicted RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 ADCYAP1R1P41586 468 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 METAP2P50579 478 aaKnown RBP eCLIP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 GABPAQ06546 454 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 PPARAQ07869 468 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 C1orf53Q5VUE5 145 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 SGMS1Q86VZ5 419 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 TMTC2Q8N394 836 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 MB21D1Q8N884 522 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 MYLIPQ8WY64 445 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 ANP32BQ92688 251 aaKnown RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 ZNF396Q96N95 335 aaPredicted RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 CRNKL1Q9BZJ0 848 aaKnown RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 TTYH1Q9H313 450 aaPredicted RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 GPHNQ9NQX3 736 aaPredicted RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 ZNFX1Q9P2E3 1918 aaKnown RBP13.57□□□□□ -0.24
CCDC33-202ENST00000321374 SMCHD1A6NHR9 2005 aa13.57□□□□□ -0.24
CCDC33-202ENST00000321374 A0A1W2PRG0 241 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 GOLGA6L4A6NEF3 574 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 CCDC69A6NI79 296 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 ZBTB43O43298 467 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 COBLO75128 1261 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 KDM4AO75164 1064 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 FOSL2P15408 326 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 PLS1Q14651 629 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 LRRC41Q15345 812 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 FAM47AQ5JRC9 791 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 SH3RF1Q7Z6J0 888 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 ABRAQ8N0Z2 381 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 FERMT2Q96AC1 680 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 SPATA32Q96LK8 384 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 MROH8Q9H579 483 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 TOMM22Q9NS69 142 aa13.56□□□□□ -0.24
CCDC33-202ENST00000321374 ORC3Q9UBD5 711 aaPredicted RBP13.56□□□□□ -0.24
CCDC33-202ENST00000321374 COL11A1P12107 1806 aaPredicted RBP13.56□□□□□ -0.24
CCDC33-202ENST00000321374 PLXNA1Q9UIW2 1896 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 TMEM265A0A087WTH1 108 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 SYCE3A1L190 88 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 TRIM43BA6NCK2 446 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 RCAN1P53805 252 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 PRAMEF19Q5SWL8 479 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 APOA5Q6Q788 366 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 NCAPG2Q86XI2 1143 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 ESR2Q92731 530 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 TRIM43Q96BQ3 446 aaPredicted RBP13.55□□□□□ -0.24
CCDC33-202ENST00000321374 MAML3Q96JK9 1138 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 C8orf76Q96K31 380 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 LY9Q9HBG7 655 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 GOLGA8AA7E2F4 631 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 MINDY4BA8MYZ0 360 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 FLOT1O75955 427 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 SLC3A2P08195 630 aaKnown RBP13.55□□□□□ -0.24
CCDC33-202ENST00000321374 FCER1AP12319 257 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 DSG3P32926 999 aa13.55□□□□□ -0.24
CCDC33-202ENST00000321374 NASPP49321 788 aaPredicted RBP13.55□□□□□ -0.24
CCDC33-202ENST00000321374 TLE2Q04725 743 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms