RNA–Protein interactions for RNA: ENST00000320857.7

SSR4-201, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSR4, Length 1,671 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-201ENST00000320857 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.24■□□□□ 0.67
SSR4-201ENST00000320857 IFNKQ9P0W0 207 aa19.24■□□□□ 0.67
SSR4-201ENST00000320857 NRBP1Q9UHY1 535 aa19.24■□□□□ 0.67
SSR4-201ENST00000320857 UTRNP46939 3433 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 STAT6P42226 847 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 FANCCQ00597 558 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 SHROOM1Q2M3G4 852 aaPredicted RBP19.23■□□□□ 0.67
SSR4-201ENST00000320857 SIAH1Q8IUQ4 282 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 ENOX1Q8TC92 643 aaKnown RBP19.23■□□□□ 0.67
SSR4-201ENST00000320857 TMEM260Q9NX78 707 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 IMPACTQ9P2X3 320 aa19.23■□□□□ 0.67
SSR4-201ENST00000320857 PPP1R11O60927 126 aaPredicted RBP19.22■□□□□ 0.67
SSR4-201ENST00000320857 GH2P01242 217 aa19.22■□□□□ 0.67
SSR4-201ENST00000320857 DHX8Q14562 1220 aaKnown RBP19.22■□□□□ 0.67
SSR4-201ENST00000320857 RRAGBQ5VZM2 374 aa19.22■□□□□ 0.67
SSR4-201ENST00000320857 RASSF8Q8NHQ8 419 aa19.22■□□□□ 0.67
SSR4-201ENST00000320857 XPO4Q9C0E2 1151 aaKnown RBP19.22■□□□□ 0.67
SSR4-201ENST00000320857 DISC1Q9NRI5 854 aa19.22■□□□□ 0.67
SSR4-201ENST00000320857 CNTNAP1P78357 1384 aa19.22■□□□□ 0.67
SSR4-201ENST00000320857 F5H6K3 240 aa19.21■□□□□ 0.67
SSR4-201ENST00000320857 RPS12P25398 132 aaKnown RBP19.21■□□□□ 0.67
SSR4-201ENST00000320857 GSDMDP57764 484 aa19.21■□□□□ 0.67
SSR4-201ENST00000320857 KLRC3Q07444 240 aa19.21■□□□□ 0.67
SSR4-201ENST00000320857 FAM83AQ86UY5 434 aa19.21■□□□□ 0.67
SSR4-201ENST00000320857 HSD3B7Q9H2F3 369 aa19.21■□□□□ 0.67
SSR4-201ENST00000320857 PRELPP51888 382 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 NOLC1Q14978 699 aaKnown RBP eCLIP19.2■□□□□ 0.66
SSR4-201ENST00000320857 KARSQ15046 597 aaKnown RBP19.2■□□□□ 0.66
SSR4-201ENST00000320857 CCDC144BQ3MJ40 725 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 KIAA1524Q8TCG1 905 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 PSTPIP2Q9H939 334 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 RMND1Q9NWS8 449 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 NDUFB10O96000 172 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 SERPINC1P01008 464 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 CLK2P49760 499 aaKnown RBP19.2■□□□□ 0.66
SSR4-201ENST00000320857 CDC37Q16543 378 aaPredicted RBP19.2■□□□□ 0.66
SSR4-201ENST00000320857 QRICH1Q2TAL8 776 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 NAP1L4Q99733 375 aaKnown RBP19.2■□□□□ 0.66
SSR4-201ENST00000320857 CUEDC2Q9H467 287 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 MAGEF1Q9HAY2 307 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 VEZTQ9HBM0 779 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 ARHGEF10LQ9HCE6 1279 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 MYOZ2Q9NPC6 264 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 SPTLC3Q9NUV7 552 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 FANCLQ9NW38 375 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 PYCARDQ9ULZ3 195 aa19.2■□□□□ 0.66
SSR4-201ENST00000320857 WNT10BO00744 389 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 MYL1P05976 194 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 BMP3P12645 472 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 CDC25AP30304 524 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 TNNI2P48788 182 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 ZNF280AP59817 542 aaPredicted RBP19.19■□□□□ 0.66
SSR4-201ENST00000320857 CABP7Q86V35 215 aa19.19■□□□□ 0.66
SSR4-201ENST00000320857 TBC1D12O60347 775 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 ATP1A3P13637 1013 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 UBASH3AP57075 661 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 FMR1Q06787 632 aaKnown RBP eCLIP19.18■□□□□ 0.66
SSR4-201ENST00000320857 RRP1BQ14684 758 aaKnown RBP19.18■□□□□ 0.66
SSR4-201ENST00000320857 CALCRLQ16602 461 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 SYDE2Q5VT97 1194 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 MCTP2Q6DN12 878 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 FILIP1Q7Z7B0 1213 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 CACTINQ8WUQ7 758 aaKnown RBP19.18■□□□□ 0.66
SSR4-201ENST00000320857 NFE2L3Q9Y4A8 694 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 PCDHA1Q9Y5I3 950 aa19.18■□□□□ 0.66
SSR4-201ENST00000320857 PP2D1A8MPX8 630 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 FZD9O00144 591 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 CASP1P29466 404 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 JAG1P78504 1218 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 SEMA3FQ13275 785 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 UBE2SQ16763 222 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 TMEM266Q2M3C6 531 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 NBPF9Q3BBW0 867 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 PPP4R3AQ6IN85 833 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 BTNL9Q6UXG8 535 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 POTEDQ86YR6 584 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 LRRC8AQ8IWT6 810 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 STAMQ92783 540 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 MTMR9Q96QG7 549 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 BLZF1Q9H2G9 400 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 RNF181Q9P0P0 153 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 GCFC2P16383 781 aaKnown RBP19.17■□□□□ 0.66
SSR4-201ENST00000320857 CDK11BP21127 795 aaKnown RBP19.17■□□□□ 0.66
SSR4-201ENST00000320857 LRMPQ12912 555 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 IKQ13123 557 aaPredicted RBP19.17■□□□□ 0.66
SSR4-201ENST00000320857 CUL4BQ13620 913 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 TMC6Q7Z403 805 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 MTRQ99707 1265 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 AMNQ9BXJ7 453 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 RAB34Q9BZG1 259 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 PGAP2Q9UHJ9 254 aa19.17■□□□□ 0.66
SSR4-201ENST00000320857 TMEM232C9JQI7 657 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 RPN1P04843 607 aaKnown RBP19.16■□□□□ 0.66
SSR4-201ENST00000320857 ZNF18P17022 549 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 LMNB1P20700 586 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 TECP42680 631 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 FXR2P51116 673 aaKnown RBP eCLIP19.16■□□□□ 0.66
SSR4-201ENST00000320857 NAALADL2Q58DX5 795 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 SPATA1Q5VX52 437 aa19.16■□□□□ 0.66
SSR4-201ENST00000320857 C9orf131Q5VYM1 1079 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms