RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 DUSP11O75319 330 aaKnown RBP30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 ADCYAP1R1P41586 468 aa30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 ATN1P54259 1190 aaPredicted RBP30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 BAATQ14032 418 aaPredicted RBP30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 CDC37Q16543 378 aaPredicted RBP30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 CCDC144BQ3MJ40 725 aa30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 CLEC4DQ8WXI8 215 aa30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 LSG1Q9H089 658 aaKnown RBP30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 CPVLQ9H3G5 476 aa30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 TAF6LQ9Y6J9 622 aa30.87■■■□□ 2.53
CDKN2A-201ENST00000304494 PTPDC1A2A3K4 754 aa30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 STOX1Q6ZVD7 989 aa30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 LENG1Q96BZ8 264 aaPredicted RBP30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 KATNBL1Q9H079 304 aa30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 RBM27Q9P2N5 1060 aaKnown RBP30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 PHF24Q9UPV7 400 aa30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 SYNRGQ9UMZ2 1314 aa30.86■■■□□ 2.53
CDKN2A-201ENST00000304494 ASTN1O14525 1302 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 LOC102724159A0A0B4J2E5 919 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 DHX16O60231 1041 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 ADAMTS4O75173 837 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 PWP2Q15269 919 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 CASC1Q6TDU7 716 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 SLC39A5Q6ZMH5 540 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 RNF207Q6ZRF8 634 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 TSEN34Q9BSV6 310 aaKnown RBP30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 PRO3102Q9H379 93 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 SPC25Q9HBM1 224 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 DNAH12Q6ZR08 3092 aa30.85■■■□□ 2.53
CDKN2A-201ENST00000304494 NEFLP07196 543 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 SYN1P17600 705 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 WTAPQ15007 396 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 USH1GQ495M9 461 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 MAF1Q9H063 256 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 ANO2Q9NQ90 1003 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 SMCHD1A6NHR9 2005 aa30.84■■■□□ 2.53
CDKN2A-201ENST00000304494 ABCB11O95342 1321 aa30.83■■■□□ 2.53
CDKN2A-201ENST00000304494 SLC34A2O95436 690 aa30.83■■■□□ 2.53
CDKN2A-201ENST00000304494 RTP1P59025 263 aa30.83■■■□□ 2.53
CDKN2A-201ENST00000304494 FERMT2Q96AC1 680 aa30.83■■■□□ 2.53
CDKN2A-201ENST00000304494 KLRF2D3W0D1 207 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 CALML3P27482 149 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 TMEM67Q5HYA8 995 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 C1orf53Q5VUE5 145 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 SLC30A10Q6XR72 485 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 MB21D2Q8IYB1 491 aaPredicted RBP30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 RGS22Q8NE09 1264 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 MORC4Q8TE76 937 aa30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 MPHOSPH6Q99547 160 aaKnown RBP30.82■■■□□ 2.52
CDKN2A-201ENST00000304494 A0A1W2PPC1 479 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 MOXD2PA6NHM9 499 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 ALDH5A1P51649 535 aaPredicted RBP30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 RPS6P62753 249 aaKnown RBP30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 SNX17Q15036 470 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 CHST3Q7LGC8 479 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 STAG2Q8N3U4 1231 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 KLHDC9Q8NEP7 349 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 PURBQ96QR8 312 aaKnown RBP30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 JMJD4Q9H9V9 463 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 VAT1LQ9HCJ6 419 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 VTA1Q9NP79 307 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 MAD2L2Q9UI95 211 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 ATP11BQ9Y2G3 1177 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 MCM3APO60318 1980 aa30.81■■■□□ 2.52
CDKN2A-201ENST00000304494 CST5P28325 142 aaPredicted RBP30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 GJA9P57773 515 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 TNFAIP2Q03169 654 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 QRICH1Q2TAL8 776 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 FBXO11Q86XK2 927 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 GDF15Q99988 308 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 MTA3Q9BTC8 594 aa30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 UPF3AQ9H1J1 476 aaKnown RBP30.8■■■□□ 2.52
CDKN2A-201ENST00000304494 A0A1W2PQ45 241 aaPredicted RBP30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 A0A1W2PQY0 241 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 PALM3A6NDB9 673 aaPredicted RBP30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 SLC27A2O14975 620 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 ADCY6O43306 1168 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 CDC45O75419 566 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 C6orf222P0C671 652 aaPredicted RBP30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 ACLYP53396 1101 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 GRM4Q14833 912 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 CATIPQ7Z7H3 387 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 PCSK9Q8NBP7 692 aaKnown RBP30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 DNERQ8NFT8 737 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 NUP133Q8WUM0 1156 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 PRKAG2Q9UGJ0 569 aa30.79■■■□□ 2.52
CDKN2A-201ENST00000304494 BMP8BP34820 402 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 ANTXR2P58335 489 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 NECTIN1Q15223 517 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 KCNA10Q16322 511 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 CREB3L3Q68CJ9 461 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 IQSEC1Q6DN90 963 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 NOL8Q76FK4 1167 aaKnown RBP30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 MCF2L2Q86YR7 1114 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 FBXO16Q8IX29 292 aaPredicted RBP30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 IGDCC4Q8TDY8 1250 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 MRPL11Q9Y3B7 192 aaKnown RBP30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 LCTP09848 1927 aa30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 RANBP2P49792 3224 aaKnown RBP30.78■■■□□ 2.52
CDKN2A-201ENST00000304494 LRRC37A2A6NM11 1700 aa30.77■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms