RNA–Protein interactions for RNA: ENST00000291300.8

HIF3A-203, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-203ENST00000291300 USP17L13C9JLJ4 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L11C9JVI0 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L18D6R9N7 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L22D6RA61 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L17D6RBQ6 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L19D6RCP7 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L20D6RJB6 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L24Q0WX57 530 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 USP17L6PQ6QN14 398 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 GMCL1Q96IK5 515 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 P2RX7Q99572 595 aaKnown RBP18.97■□□□□ 0.63
HIF3A-203ENST00000291300 BLZF1Q9H2G9 400 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 GJA3Q9Y6H8 435 aa18.97■□□□□ 0.63
HIF3A-203ENST00000291300 TNNI2P48788 182 aa18.96■□□□□ 0.63
HIF3A-203ENST00000291300 ZNF280AP59817 542 aaPredicted RBP18.96■□□□□ 0.63
HIF3A-203ENST00000291300 RASA3Q14644 834 aa18.96■□□□□ 0.63
HIF3A-203ENST00000291300 FAM83AQ86UY5 434 aa18.96■□□□□ 0.63
HIF3A-203ENST00000291300 MED15Q96RN5 788 aa18.96■□□□□ 0.63
HIF3A-203ENST00000291300 PCDHA1Q9Y5I3 950 aa18.96■□□□□ 0.63
HIF3A-203ENST00000291300 ZNF541Q9H0D2 1346 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 NEMFO60524 1076 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 ATP1A3P13637 1013 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 CLCN1P35523 988 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
HIF3A-203ENST00000291300 DPYDQ12882 1025 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 TNIP1Q15025 636 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 ZYXQ15942 572 aaKnown RBP18.95■□□□□ 0.62
HIF3A-203ENST00000291300 CCDC144BQ3MJ40 725 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 TBC1D10BQ4KMP7 808 aaPredicted RBP18.95■□□□□ 0.62
HIF3A-203ENST00000291300 NAALADL2Q58DX5 795 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 MICALL2Q8IY33 904 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 MYO1BO43795 1136 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 OR52Z1P0C646 297 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 BMP3P12645 472 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 PTGS1P23219 599 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 LMOD1P29536 600 aaPredicted RBP18.95■□□□□ 0.62
HIF3A-203ENST00000291300 PPP1R18Q6NYC8 613 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 GJA10Q969M2 543 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 TEPSINQ96N21 525 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 PSTPIP2Q9H939 334 aa18.95■□□□□ 0.62
HIF3A-203ENST00000291300 HOOK1Q9UJC3 728 aaKnown RBP18.95■□□□□ 0.62
HIF3A-203ENST00000291300 FZD9O00144 591 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 IKQ13123 557 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-203ENST00000291300 CUL4BQ13620 913 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 USH1GQ495M9 461 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 SYDE2Q5VT97 1194 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 KANK3Q6NY19 840 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 CUL5Q93034 780 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 UIMC1Q96RL1 719 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 TBC1D12O60347 775 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 MSNP26038 577 aaKnown RBP18.94■□□□□ 0.62
HIF3A-203ENST00000291300 CAP2P40123 477 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 TECP42680 631 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 FAM83BQ5T0W9 1011 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 TRMT44Q8IYL2 757 aaKnown RBP18.94■□□□□ 0.62
HIF3A-203ENST00000291300 SMYD4Q8IYR2 804 aaPredicted RBP18.94■□□□□ 0.62
HIF3A-203ENST00000291300 IQUBQ8NA54 791 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 TMX2Q9Y320 296 aa18.94■□□□□ 0.62
HIF3A-203ENST00000291300 CD44P16070 742 aaKnown RBP18.93■□□□□ 0.62
HIF3A-203ENST00000291300 PRPHP41219 470 aa18.93■□□□□ 0.62
HIF3A-203ENST00000291300 CCDC186Q7Z3E2 898 aa18.93■□□□□ 0.62
HIF3A-203ENST00000291300 DRC7Q8IY82 874 aa18.93■□□□□ 0.62
HIF3A-203ENST00000291300 C17orf53Q8N3J3 647 aaPredicted RBP18.93■□□□□ 0.62
HIF3A-203ENST00000291300 MTMR9Q96QG7 549 aa18.93■□□□□ 0.62
HIF3A-203ENST00000291300 CNOT7Q9UIV1 285 aaKnown RBP18.93■□□□□ 0.62
HIF3A-203ENST00000291300 LTBP3Q9NS15 1303 aa18.93■□□□□ 0.62
HIF3A-203ENST00000291300 PHF20L1A8MW92 1017 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 TXKP42681 527 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 HSP90AA4PQ58FG1 418 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 DISC1Q9NRI5 854 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 PRR12Q9ULL5 1215 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 LAD1O00515 517 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 OPLAHO14841 1288 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 IKBKBO14920 756 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 MAP3K10Q02779 954 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 ARID5BQ14865 1188 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 BTNL9Q6UXG8 535 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 MMTAG2Q9BU76 263 aaKnown RBP18.92■□□□□ 0.62
HIF3A-203ENST00000291300 ARHGEF10LQ9HCE6 1279 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 FANCLQ9NW38 375 aa18.92■□□□□ 0.62
HIF3A-203ENST00000291300 MEIS2O14770 477 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 MRPL12P52815 198 aaKnown RBP18.91■□□□□ 0.62
HIF3A-203ENST00000291300 MYL5Q02045 173 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 DGKZQ13574 1117 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 DPF2Q92785 391 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 MRFAP1L1Q96HT8 127 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 XPO4Q9C0E2 1151 aaKnown RBP18.91■□□□□ 0.62
HIF3A-203ENST00000291300 IFNKQ9P0W0 207 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 ATAD5Q96QE3 1844 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 STAT6P42226 847 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 LRMPQ12912 555 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 HACL1Q9UJ83 578 aa18.91■□□□□ 0.62
HIF3A-203ENST00000291300 SMTNL1A8MU46 457 aa18.9■□□□□ 0.62
HIF3A-203ENST00000291300 COBLO75128 1261 aa18.9■□□□□ 0.62
HIF3A-203ENST00000291300 RPS12P25398 132 aaKnown RBP18.9■□□□□ 0.62
HIF3A-203ENST00000291300 UBA7P41226 1012 aa18.9■□□□□ 0.62
HIF3A-203ENST00000291300 PTPN21Q16825 1174 aa18.9■□□□□ 0.62
HIF3A-203ENST00000291300 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.9■□□□□ 0.62
HIF3A-203ENST00000291300 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
HIF3A-203ENST00000291300 CCSER1Q9C0I3 900 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms