RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 PPME1Q9Y570 386 aa8.75□□□□□ -1.01
EPHA4-201ENST00000281821 A0A1W2PQ27 194 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 A0A1W2PQ64 194 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 A0A1W2PQD8 194 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 KPNA6O60684 536 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 MRE11P49959 708 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 HMGCS2P54868 508 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 KLHL40Q2TBA0 621 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 IMPG2Q9BZV3 1241 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 MTIF3Q9H2K0 278 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 KDM3BQ7LBC6 1761 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 NKRFO15226 690 aaKnown RBP eCLIP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 EXOSC10Q01780 885 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 FAM160A1Q05DH4 1040 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 GSE1Q14687 1217 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 STX1AQ16623 288 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 SYCP3Q8IZU3 236 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 GLG1Q92896 1179 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 NUDT12Q9BQG2 462 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 RPAP3Q9H6T3 665 aaPredicted RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 MATR3P43243 847 aaKnown RBP eCLIP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 FAM83BQ5T0W9 1011 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 MIS18BP1Q6P0N0 1132 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 CNNM4Q6P4Q7 775 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 ANO3Q9BYT9 981 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 XIRP1Q702N8 1843 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 PCDHA12Q9UN75 941 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 TMEM88BA6NKF7 163 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 ADD1P35611 737 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 ME3Q16798 604 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 USH1GQ495M9 461 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 NOL9Q5SY16 702 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 NSUN7Q8NE18 718 aaKnown RBP8.74□□□□□ -1.01
EPHA4-201ENST00000281821 NRAPQ86VF7 1730 aa8.74□□□□□ -1.01
EPHA4-201ENST00000281821 GNRH1P01148 92 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PPP2R3AQ06190 1150 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 ZNF397Q8NF99 534 aaPredicted RBP8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PIGSQ96S52 555 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TMEM39BQ9GZU3 492 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PRKAG2Q9UGJ0 569 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 SPDYE5A6NIY4 337 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PSAPP07602 524 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 DEFB115Q30KQ5 88 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 NBPF11Q86T75 865 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 NACC1Q96RE7 527 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TIPINQ9BVW5 301 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 POLR3EQ9NVU0 708 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 ABCA3Q99758 1704 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TCRBV5S4A2TA0A5A2 114 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 MSCO60682 206 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 GAP43P17677 238 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TRIML1Q8N9V2 468 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TMEM87AQ8NBN3 555 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 SNX29Q8TEQ0 813 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 KATNAL1Q9BW62 490 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 LY9Q9HBG7 655 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 XPOTO43592 962 aaKnown RBP8.73□□□□□ -1.01
EPHA4-201ENST00000281821 RHBDL3P58872 404 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 ASIC1P78348 528 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PPFIBP1Q86W92 1011 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 RAB11FIP4Q86YS3 637 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 MMP19Q99542 508 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 ARID3AQ99856 593 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 TMEM106CQ9BVX2 250 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 RRAGCQ9HB90 399 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PPP1R9AQ9ULJ8 1098 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PCDHB13Q9Y5F0 798 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 ATRNL1Q5VV63 1379 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 CARNS1A5YM72 827 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 MMP1P03956 469 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 CYP2D6P10635 497 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 KLRK1P26718 216 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 MCM7P33993 719 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 EVCP57679 992 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 MTMR2Q13614 643 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 PDCL3Q9H2J4 239 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 SLC45A1Q9Y2W3 748 aa8.73□□□□□ -1.01
EPHA4-201ENST00000281821 BRD1O95696 1058 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 MUTP22033 750 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 QRICH1Q2TAL8 776 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 SCFD2Q8WU76 684 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 TPCN1Q9ULQ1 816 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 TESPA1A2RU30 521 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-201ENST00000281821 CCNT1O60563 726 aaKnown RBP8.72□□□□□ -1.01
EPHA4-201ENST00000281821 PPP6R2O75170 966 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 MAP2K1Q02750 393 aaPredicted RBP8.72□□□□□ -1.01
EPHA4-201ENST00000281821 STRN3Q13033 797 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 UBA5Q9GZZ9 404 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 RIC8AQ9NPQ8 531 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 HOMER2Q9NSB8 354 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 COL4A3BPQ9Y5P4 624 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 LAMB4A4D0S4 1761 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 MARF1Q9Y4F3 1742 aaKnown RBP8.72□□□□□ -1.01
EPHA4-201ENST00000281821 POSTNQ15063 836 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 SPICE1Q8N0Z3 855 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 TCP11Q8WWU5 503 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 SLC7A3Q8WY07 619 aa8.72□□□□□ -1.01
EPHA4-201ENST00000281821 BICD1Q96G01 975 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms