RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 UBA5Q9GZZ9 404 aa18.83■□□□□ 0.6
USE1-201ENST00000263897 ASTN1O14525 1302 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 TRDNQ13061 729 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 BAATQ14032 418 aaPredicted RBP18.82■□□□□ 0.6
USE1-201ENST00000263897 SNX17Q15036 470 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 CYB5R4Q7L1T6 521 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 KLHDC9Q8NEP7 349 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 CLEC4DQ8WXI8 215 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 MAP4K1Q92918 833 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 CPVLQ9H3G5 476 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 ATP11BQ9Y2G3 1177 aa18.82■□□□□ 0.6
USE1-201ENST00000263897 WDR19Q8NEZ3 1342 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 SYNRGQ9UMZ2 1314 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 NFIBO00712 420 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 ADCY6O43306 1168 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 SEC23AQ15436 765 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 ASPRV1Q53RT3 343 aa18.81■□□□□ 0.6
USE1-201ENST00000263897 CCSAPQ6IQ19 270 aaPredicted RBP18.81■□□□□ 0.6
USE1-201ENST00000263897 PURBQ96QR8 312 aaKnown RBP18.81■□□□□ 0.6
USE1-201ENST00000263897 RANBP2P49792 3224 aaKnown RBP18.81■□□□□ 0.6
USE1-201ENST00000263897 PARP1P09874 1014 aaKnown RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 ACLYP53396 1101 aa18.8■□□□□ 0.6
USE1-201ENST00000263897 KCNA10Q16322 511 aa18.8■□□□□ 0.6
USE1-201ENST00000263897 IFIT1BQ5T764 474 aaKnown RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 CENPQQ7L2Z9 268 aaPredicted RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 ADGRF4Q8IZF3 695 aa18.8■□□□□ 0.6
USE1-201ENST00000263897 MORC4Q8TE76 937 aa18.8■□□□□ 0.6
USE1-201ENST00000263897 UPF3AQ9H1J1 476 aaKnown RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 ADD3Q9UEY8 706 aaKnown RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 DDX49Q9Y6V7 483 aaKnown RBP18.8■□□□□ 0.6
USE1-201ENST00000263897 A0A1W2PQ45 241 aaPredicted RBP18.79■□□□□ 0.6
USE1-201ENST00000263897 A0A1W2PQY0 241 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 PTPDC1A2A3K4 754 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 E7EWF7 191 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 CST5P28325 142 aaPredicted RBP18.79■□□□□ 0.6
USE1-201ENST00000263897 GJA9P57773 515 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 TNFAIP2Q03169 654 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 TRIM60Q495X7 471 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 SPC25Q9HBM1 224 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 PCDH10Q9P2E7 1040 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 TAF6LQ9Y6J9 622 aa18.79■□□□□ 0.6
USE1-201ENST00000263897 LOC102724159A0A0B4J2E5 919 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 MYADML2A6NDP7 307 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 MOXD2PA6NHM9 499 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 C6orf222P0C671 652 aaPredicted RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 NKX3-2P78367 333 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 IRX5P78411 483 aaPredicted RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 MDM2Q00987 491 aaPredicted RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 PWP2Q15269 919 aaKnown RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 IQSEC1Q6DN90 963 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 RNF207Q6ZRF8 634 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 KIAA1211Q6ZU35 1233 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 PCSK9Q8NBP7 692 aaKnown RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 RGS22Q8NE09 1264 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 NCOA7Q8NI08 942 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 NUP133Q8WUM0 1156 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 UBE2OQ9C0C9 1292 aaKnown RBP18.78■□□□□ 0.6
USE1-201ENST00000263897 LCTP09848 1927 aa18.78■□□□□ 0.6
USE1-201ENST00000263897 DNAH12Q6ZR08 3092 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 CALML3P27482 149 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 ALDH5A1P51649 535 aaPredicted RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 RPS6P62753 249 aaKnown RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 TLE2Q04725 743 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 CDC37Q16543 378 aaPredicted RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 USH1GQ495M9 461 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 GNASQ5JWF2 1037 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 STOX1Q6ZVD7 989 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 EEPD1Q7L9B9 569 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 RALYLQ86SE5 291 aaKnown RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 STAG2Q8N3U4 1231 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 LBHD1Q9BQE6 289 aaPredicted RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 MAF1Q9H063 256 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 JMJD4Q9H9V9 463 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 VAT1LQ9HCJ6 419 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 VTA1Q9NP79 307 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 PDGFCQ9NRA1 345 aa18.77■□□□□ 0.6
USE1-201ENST00000263897 GNEQ9Y223 722 aaKnown RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 RBM8AQ9Y5S9 174 aaKnown RBP18.77■□□□□ 0.6
USE1-201ENST00000263897 KLRF2D3W0D1 207 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 IFIT3O14879 490 aaKnown RBP18.76■□□□□ 0.59
USE1-201ENST00000263897 CTAGE5O15320 804 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 SLC30A10Q6XR72 485 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 NOL8Q76FK4 1167 aaKnown RBP18.76■□□□□ 0.59
USE1-201ENST00000263897 SKAP1Q86WV1 359 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 ESYT1Q9BSJ8 1104 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 STARD7Q9NQZ5 370 aa18.76■□□□□ 0.59
USE1-201ENST00000263897 ELP1O95163 1332 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 ABCB11O95342 1321 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 ERICH2A1L162 156 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 DHX16O60231 1041 aaKnown RBP18.75■□□□□ 0.59
USE1-201ENST00000263897 ASGR1P07306 291 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 SMPD1P17405 629 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 QRICH1Q2TAL8 776 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 BMP2KLQ5H9B9 411 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 SH3RF1Q7Z6J0 888 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 FBXO11Q86XK2 927 aa18.75■□□□□ 0.59
USE1-201ENST00000263897 FBXO16Q8IX29 292 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms