RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 MDM2Q00987 491 aaPredicted RBP16.66■□□□□ 0.26
GPN3-201ENST00000228827 TRDNQ13061 729 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 BAATQ14032 418 aaPredicted RBP16.66■□□□□ 0.26
GPN3-201ENST00000228827 TRIM60Q495X7 471 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 IFIT1BQ5T764 474 aaKnown RBP16.66■□□□□ 0.26
GPN3-201ENST00000228827 ANKS1AQ92625 1134 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 PHF24Q9UPV7 400 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 TAF6LQ9Y6J9 622 aa16.66■□□□□ 0.26
GPN3-201ENST00000228827 LAMA4Q16363 1823 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 MYADML2A6NDP7 307 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 USH1GQ495M9 461 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 EEPD1Q7L9B9 569 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 KATNBL1Q9H079 304 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 PLXNA1Q9UIW2 1896 aa16.65■□□□□ 0.26
GPN3-201ENST00000228827 ZNFX1Q9P2E3 1918 aaKnown RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 A0A1W2PQ45 241 aaPredicted RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 A0A1W2PQY0 241 aa16.64■□□□□ 0.25
GPN3-201ENST00000228827 DHX16O60231 1041 aaKnown RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 DUSP11O75319 330 aaKnown RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 CALML3P27482 149 aa16.64■□□□□ 0.25
GPN3-201ENST00000228827 SLC30A10Q6XR72 485 aa16.64■□□□□ 0.25
GPN3-201ENST00000228827 NOL8Q76FK4 1167 aaKnown RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 CLEC4DQ8WXI8 215 aa16.64■□□□□ 0.25
GPN3-201ENST00000228827 PRDM5Q9NQX1 630 aaPredicted RBP16.64■□□□□ 0.25
GPN3-201ENST00000228827 PRKAG2Q9UGJ0 569 aa16.64■□□□□ 0.25
GPN3-201ENST00000228827 E7EWF7 191 aa16.63■□□□□ 0.25
GPN3-201ENST00000228827 PARP1P09874 1014 aaKnown RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 C6orf222P0C671 652 aaPredicted RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 KCNA10Q16322 511 aa16.63■□□□□ 0.25
GPN3-201ENST00000228827 CDC37Q16543 378 aaPredicted RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 ASPRV1Q53RT3 343 aa16.63■□□□□ 0.25
GPN3-201ENST00000228827 CENPQQ7L2Z9 268 aaPredicted RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 FBXO16Q8IX29 292 aaPredicted RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 ADGRF4Q8IZF3 695 aa16.63■□□□□ 0.25
GPN3-201ENST00000228827 UBE2OQ9C0C9 1292 aaKnown RBP16.63■□□□□ 0.25
GPN3-201ENST00000228827 VAT1LQ9HCJ6 419 aa16.63■□□□□ 0.25
GPN3-201ENST00000228827 PTGS1P23219 599 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 BMP8BP34820 402 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 ACLYP53396 1101 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 TNFAIP2Q03169 654 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 SNX17Q15036 470 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 SEC23AQ15436 765 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 RNF207Q6ZRF8 634 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 STOX1Q6ZVD7 989 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 CHST3Q7LGC8 479 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 RALYLQ86SE5 291 aaKnown RBP16.62■□□□□ 0.25
GPN3-201ENST00000228827 KLHDC9Q8NEP7 349 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 MAP4K1Q92918 833 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 SPC25Q9HBM1 224 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 PDGFCQ9NRA1 345 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 PNMA2Q9UL42 364 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 RBM8AQ9Y5S9 174 aaKnown RBP16.62■□□□□ 0.25
GPN3-201ENST00000228827 WDR19Q8NEZ3 1342 aa16.62■□□□□ 0.25
GPN3-201ENST00000228827 A0A1W2PPC1 479 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 IFIT3O14879 490 aaKnown RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 ALDH5A1P51649 535 aaPredicted RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 TLE2Q04725 743 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 KIAA1211Q6ZU35 1233 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 STAG2Q8N3U4 1231 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 NCOA7Q8NI08 942 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 LBHD1Q9BQE6 289 aaPredicted RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 TSEN34Q9BSV6 310 aaKnown RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 MOXD2PA6NHM9 499 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 SOX1O00570 391 aaPredicted RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 CEP290O15078 2479 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 GJA9P57773 515 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 RPS6P62753 249 aaKnown RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 BEX3Q00994 111 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 QRICH1Q2TAL8 776 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 TMEM63BQ5T3F8 832 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 CCSAPQ6IQ19 270 aaPredicted RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 SH3RF1Q7Z6J0 888 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 VTI1AQ96AJ9 217 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 UPF3AQ9H1J1 476 aaKnown RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 SENP2Q9HC62 589 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 STARD7Q9NQZ5 370 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 PDLIM7Q9NR12 457 aa16.61■□□□□ 0.25
GPN3-201ENST00000228827 ADD3Q9UEY8 706 aaKnown RBP16.61■□□□□ 0.25
GPN3-201ENST00000228827 ERICH2A1L162 156 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 PQBP1O60828 265 aaKnown RBP16.6■□□□□ 0.25
GPN3-201ENST00000228827 ASGR1P07306 291 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 SMPD1P17405 629 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 GNASQ5JWF2 1037 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 C1orf53Q5VUE5 145 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 TAPT1Q6NXT6 567 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 NUP133Q8WUM0 1156 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 LSG1Q9H089 658 aaKnown RBP16.6■□□□□ 0.25
GPN3-201ENST00000228827 JMJD4Q9H9V9 463 aa16.6■□□□□ 0.25
GPN3-201ENST00000228827 DYNC1LI2O43237 492 aaPredicted RBP16.59■□□□□ 0.25
GPN3-201ENST00000228827 CST5P28325 142 aaPredicted RBP16.59■□□□□ 0.25
GPN3-201ENST00000228827 WTAPQ15007 396 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 TLK2Q86UE8 772 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 FBXO11Q86XK2 927 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 TDHQ8IZJ6 230 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 PCSK9Q8NBP7 692 aaKnown RBP16.59■□□□□ 0.25
GPN3-201ENST00000228827 MORC4Q8TE76 937 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 TBC1D5Q92609 795 aa16.59■□□□□ 0.25
GPN3-201ENST00000228827 LRCH3Q96II8 777 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms