RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 GHRHRQ02643 423 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 IFFO2Q5TF58 517 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 PAXIP1Q6ZW49 1069 aaPredicted RBP16.15■□□□□ 0.18
SEC61B-201ENST00000223641 RIOX2Q8IUF8 465 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 CPXCR1Q8N123 301 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 PARK7Q99497 189 aaKnown RBP16.15■□□□□ 0.18
SEC61B-201ENST00000223641 MAF1Q9H063 256 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 TXNRD2Q9NNW7 524 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 RIC8AQ9NPQ8 531 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 MORF4L1Q9UBU8 362 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 CCPG1Q9ULG6 757 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 MRPL11Q9Y3B7 192 aaKnown RBP16.15■□□□□ 0.18
SEC61B-201ENST00000223641 RIPK3Q9Y572 518 aa16.15■□□□□ 0.18
SEC61B-201ENST00000223641 RBBP6Q7Z6E9 1792 aaKnown RBP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 AOC2O75106 756 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 ZSCAN22P10073 491 aaPredicted RBP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 HSPA6P17066 643 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 U2AF2P26368 475 aaKnown RBP eCLIP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 GNA11P29992 359 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 VEGFBP49765 207 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 FOSBP53539 338 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 NLRP5P59047 1200 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 HTRA3P83110 453 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 TKFCQ3LXA3 575 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 USH1GQ495M9 461 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 CLEC4DQ8WXI8 215 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 TNFRSF25Q93038 417 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 SPATC1LQ9H0A9 340 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 GLT8D2Q9H1C3 349 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 C6orf50Q9HD87 102 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 PCDHA4Q9UN74 947 aa16.14■□□□□ 0.17
SEC61B-201ENST00000223641 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
SEC61B-201ENST00000223641 VPS37CA5D8V6 355 aaPredicted RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 PIK3CDO00329 1044 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 MEIS2O14770 477 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 ADAMTS3O15072 1205 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 TAL1P17542 331 aaPredicted RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 Q3C1V9 767 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 SNRNP48Q6IEG0 339 aaKnown RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 DIS3L2Q8IYB7 885 aaKnown RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 BLIDQ8IZY5 108 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 SAMD3Q8N6K7 520 aa16.13■□□□□ 0.17
SEC61B-201ENST00000223641 SMCR8Q8TEV9 937 aaPredicted RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 FOXP1Q9H334 677 aaPredicted RBP16.13■□□□□ 0.17
SEC61B-201ENST00000223641 BTBD18B2RXH4 712 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 CA12O43570 354 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 TLR2O60603 784 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 PEX10O60683 326 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 SLC25A27O95847 323 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 ALDH1A1P00352 501 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 BCRP11274 1271 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 ALAS1P13196 640 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 KRT2P35908 639 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 MRPL12P52815 198 aaKnown RBP16.12■□□□□ 0.17
SEC61B-201ENST00000223641 ERVK-9P63128 1117 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 ERVK-24P63145 666 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 RESTQ13127 1097 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 GRM1Q13255 1194 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 SAFBQ15424 915 aaKnown RBP eCLIP16.12■□□□□ 0.17
SEC61B-201ENST00000223641 MUM1L1Q5H9M0 696 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 CHST13Q8NET6 341 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 BICD2Q8TD16 824 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 OXER1Q8TDS5 423 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 CUL5Q93034 780 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 CFHR5Q9BXR6 569 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 MOV10L1Q9BXT6 1211 aaKnown RBP16.12■□□□□ 0.17
SEC61B-201ENST00000223641 ZSCAN16Q9H4T2 348 aaPredicted RBP16.12■□□□□ 0.17
SEC61B-201ENST00000223641 PSTPIP2Q9H939 334 aa16.12■□□□□ 0.17
SEC61B-201ENST00000223641 MAP3K20Q9NYL2 800 aaKnown RBP16.12■□□□□ 0.17
SEC61B-201ENST00000223641 KIF28PB7ZC32 967 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 NFIBO00712 420 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 F13A1P00488 732 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 COPB2P35606 906 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 ADCY7P51828 1080 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 NR5A1Q13285 461 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 TAF1CQ15572 869 aaPredicted RBP16.11■□□□□ 0.17
SEC61B-201ENST00000223641 FAM110CQ1W6H9 321 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 C17orf99Q6UX52 265 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 SHCBP1Q8NEM2 672 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 GPRC5AQ8NFJ5 357 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 PAGR1Q9BTK6 254 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 ZFYVE28Q9HCC9 887 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 RNF146Q9NTX7 359 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 PCDHA6Q9UN73 950 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 PCDHA8Q9Y5H6 950 aa16.11■□□□□ 0.17
SEC61B-201ENST00000223641 MYH15Q9Y2K3 1946 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 HSD17B4P51659 736 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 PLS1Q14651 629 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 MCTP2Q6DN12 878 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 BRAPQ7Z569 592 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 MCF2L2Q86YR7 1114 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 ANKRD13CQ8N6S4 541 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 TBC1D5Q92609 795 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 BRMS1Q9HCU9 246 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 FBXO40Q9UH90 709 aa16.1■□□□□ 0.17
SEC61B-201ENST00000223641 CRHR2Q13324 411 aa16.09■□□□□ 0.17
SEC61B-201ENST00000223641 EARS2Q5JPH6 523 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms