RNA–Protein interactions for RNA: ENST00000222690.10

H2AFV-201, Transcript of H2A histone family member V, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene H2AFV, Length 3,804 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFV-201ENST00000222690 DYMQ7RTS9 669 aa19.19■□□□□ 0.66
H2AFV-201ENST00000222690 DNAJC7Q99615 494 aa19.19■□□□□ 0.66
H2AFV-201ENST00000222690 TDRD12Q587J7 1177 aaKnown RBP19.19■□□□□ 0.66
H2AFV-201ENST00000222690 FECHP22830 423 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 RNASE9P60153 205 aaKnown RBP19.18■□□□□ 0.66
H2AFV-201ENST00000222690 ERFEQ4G0M1 354 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 ARL6IP4Q66PJ3 421 aaKnown RBP19.18■□□□□ 0.66
H2AFV-201ENST00000222690 IQCEQ6IPM2 695 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 C3orf67Q6ZVT6 689 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 HDAC7Q8WUI4 952 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 MKRN1Q9UHC7 482 aaKnown RBP19.18■□□□□ 0.66
H2AFV-201ENST00000222690 TACC1O75410 805 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 FAM84BQ96KN1 310 aaPredicted RBP19.18■□□□□ 0.66
H2AFV-201ENST00000222690 UIMC1Q96RL1 719 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 NKRFO15226 690 aaKnown RBP eCLIP19.18■□□□□ 0.66
H2AFV-201ENST00000222690 TSPY3P0CV98 308 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 TSPY8P0CW00 308 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 CCT5P48643 541 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 NAPAP54920 295 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 PARP10Q53GL7 1025 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 P2RX5Q93086 422 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 THAP9Q9H5L6 903 aa19.18■□□□□ 0.66
H2AFV-201ENST00000222690 MYH6P13533 1939 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 TTC31Q49AM3 519 aaPredicted RBP19.17■□□□□ 0.66
H2AFV-201ENST00000222690 MICALL1Q8N3F8 863 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 ZNF384Q8TF68 577 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 PDS5AQ29RF7 1337 aaKnown RBP19.17■□□□□ 0.66
H2AFV-201ENST00000222690 BUB1O43683 1085 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 TXNRD1Q16881 649 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 SLC44A5Q8NCS7 719 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 CELF1Q92879 486 aaKnown RBP19.17■□□□□ 0.66
H2AFV-201ENST00000222690 EHD4Q9H223 541 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 ZBED6P86452 979 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 NFRKBQ6P4R8 1299 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 RRAGAQ7L523 313 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 LRRC1Q9BTT6 524 aa19.17■□□□□ 0.66
H2AFV-201ENST00000222690 SAP30BPQ9UHR5 308 aaKnown RBP19.17■□□□□ 0.66
H2AFV-201ENST00000222690 A0A1W2PQC6 194 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 NCK2O43639 380 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 TXKP42681 527 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 TTI2Q6NXR4 508 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 CACNA2D4Q7Z3S7 1137 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 RRP36Q96EU6 259 aaKnown RBP19.16■□□□□ 0.66
H2AFV-201ENST00000222690 CAPN6Q9Y6Q1 641 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 SRGNP10124 158 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 ARID5AQ03989 594 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 ZNF507Q8TCN5 953 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 CDK5RAP3Q96JB5 506 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 LRP6O75581 1613 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 ADAMTSL3P82987 1691 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 BICDL2A1A5D9 508 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 SSBP05455 408 aaKnown RBP eCLIP19.16■□□□□ 0.66
H2AFV-201ENST00000222690 ZNF444Q8N0Y2 327 aaPredicted RBP19.16■□□□□ 0.66
H2AFV-201ENST00000222690 NSUN4Q96CB9 384 aaKnown RBP19.16■□□□□ 0.66
H2AFV-201ENST00000222690 DMGDHQ9UI17 866 aaKnown RBP19.16■□□□□ 0.66
H2AFV-201ENST00000222690 MINPP1Q9UNW1 487 aa19.16■□□□□ 0.66
H2AFV-201ENST00000222690 PLEKHG2Q9H7P9 1386 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 NTSR2O95665 410 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 PAPD7Q5XG87 772 aaKnown RBP19.15■□□□□ 0.66
H2AFV-201ENST00000222690 CCNI2Q6ZMN8 369 aaPredicted RBP19.15■□□□□ 0.66
H2AFV-201ENST00000222690 FAM114A1Q8IWE2 563 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 KCTD16Q68DU8 428 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 GIMAP8Q8ND71 665 aaPredicted RBP19.15■□□□□ 0.66
H2AFV-201ENST00000222690 DUSP9Q99956 384 aaKnown RBP19.15■□□□□ 0.66
H2AFV-201ENST00000222690 NUP58Q9BVL2 599 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 PCDHA6Q9UN73 950 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 PCDHA8Q9Y5H6 950 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 BAZ2AQ9UIF9 1905 aaKnown RBP19.15■□□□□ 0.66
H2AFV-201ENST00000222690 IFT81Q8WYA0 676 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 NLRC4Q9NPP4 1024 aa19.15■□□□□ 0.66
H2AFV-201ENST00000222690 CHD4Q14839 1912 aa19.14■□□□□ 0.66
H2AFV-201ENST00000222690 PPFIA4O75335 1185 aa19.14■□□□□ 0.66
H2AFV-201ENST00000222690 CCNE1P24864 410 aa19.14■□□□□ 0.66
H2AFV-201ENST00000222690 EIF4A3P38919 411 aaKnown RBP19.14■□□□□ 0.66
H2AFV-201ENST00000222690 PAFAH1B1P43034 410 aa19.14■□□□□ 0.66
H2AFV-201ENST00000222690 UBE4AQ14139 1066 aa19.14■□□□□ 0.66
H2AFV-201ENST00000222690 KLRC4O43908 158 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 CAMTA2O94983 1202 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 VAV2P52735 878 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 INTS5Q6P9B9 1019 aaKnown RBP19.14■□□□□ 0.65
H2AFV-201ENST00000222690 C4orf32Q8N8J7 132 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 RPGRIP1Q96KN7 1286 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 ALS2CR12Q96Q35 445 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 RHOBTB3O94955 611 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 HIBADHP31937 336 aaKnown RBP19.14■□□□□ 0.65
H2AFV-201ENST00000222690 SLC20A2Q08357 652 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 BCAS4Q8TDM0 211 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 CENPHQ9H3R5 247 aa19.14■□□□□ 0.65
H2AFV-201ENST00000222690 LOC102724428A0A0B4J2F2 783 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 ZEB2O60315 1214 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 MARCH6O60337 910 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 LIG3P49916 1009 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 SIK1P57059 783 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 SOGA3Q5TF21 947 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 SAMM50Q9Y512 469 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 DDX60Q8IY21 1712 aaKnown RBP19.13■□□□□ 0.65
H2AFV-201ENST00000222690 MAGEA1P43355 309 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 ATP1A2P50993 1020 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 LRRC41Q15345 812 aa19.13■□□□□ 0.65
H2AFV-201ENST00000222690 RCSD1Q6JBY9 416 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms