RNA–Protein interactions for RNA: ENST00000027335.7

CDH17-201, Transcript of cadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH17, Length 3,693 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17-201ENST00000027335 PDGFDQ9GZP0 370 aaPredicted RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 CENPHQ9H3R5 247 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 G3BP2Q9UN86 482 aaKnown RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 TMA7Q9Y2S6 64 aaKnown RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 SAMM50Q9Y512 469 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 PCDHB6Q9Y5E3 794 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 MRC1P22897 1456 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 FRMPD2Q68DX3 1309 aaPredicted RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 HOXA2O43364 376 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 AKR1B10O60218 316 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 BBOX1O75936 387 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 PLEKHA8P1O95397 391 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 PLCG2P16885 1265 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 CASP1P29466 404 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 GNA11P29992 359 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 BTDP43251 543 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 TNS4Q8IZW8 715 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 IGSF22Q8N9C0 903 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 SLC44A5Q8NCS7 719 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 AGBL1Q96MI9 1066 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 TSG101Q99816 390 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 BAG1Q99933 345 aaPredicted RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.51□□□□□ -1.53
CDH17-201ENST00000027335 GOLPH3LQ9H4A5 285 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 TAB2Q9NYJ8 693 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 PKD2L1Q9P0L9 805 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 BIN2Q9UBW5 565 aaPredicted RBP5.51□□□□□ -1.53
CDH17-201ENST00000027335 GUCA1BQ9UMX6 200 aa5.51□□□□□ -1.53
CDH17-201ENST00000027335 USP17L3A6NCW0 530 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 USP17L4A6NCW7 530 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 FAM196BA6NMK8 535 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 ZMYND10O75800 440 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 ATP1A3P13637 1013 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 KRT79Q5XKE5 535 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 USP17L1Q7RTZ2 530 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 MB21D2Q8IYB1 491 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 FLAD1Q8NFF5 587 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 CUL5Q93034 780 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 DESI2Q9BSY9 194 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 CSRNP2Q9H175 543 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 CD209Q9NNX6 404 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 RMND1Q9NWS8 449 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 GSG1L2A8MUP6 293 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 KLRF2D3W0D1 207 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 UBE2Q2LH0YL09 131 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 SLU7O95391 586 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 CCDC175P0C221 793 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 IBSPP21815 317 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 PTPROQ16827 1216 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 GJC2Q5T442 439 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 PROM2Q8N271 834 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 TMEM87AQ8NBN3 555 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 VPS37AQ8NEZ2 397 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 SH3RF3Q8TEJ3 882 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 SCYL1Q96KG9 808 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 NAP1L4Q99733 375 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 USP40Q9NVE5 1235 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 POLR3EQ9NVU0 708 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 CHCHD3Q9NX63 227 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 TBC1D7Q9P0N9 293 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 LEMD3Q9Y2U8 911 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 DLEC1Q9Y238 1755 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 BAZ2BQ9UIF8 2168 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 CLRN2A0PK11 232 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 SMCO2A6NFE2 343 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 KIF28PB7ZC32 967 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 IFNAR1P17181 557 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 ATICP31939 592 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 GUCY1A2P33402 732 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 USP8P40818 1118 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 EXOSC10Q01780 885 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 PDE4DQ08499 809 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 E2F5Q15329 346 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 AOC3Q16853 763 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 USH1GQ495M9 461 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 TBC1D10BQ4KMP7 808 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 CCDC92Q53HC0 331 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 NAALADL2Q58DX5 795 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 ZNF569Q5MCW4 686 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 OXER1Q8TDS5 423 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 SPOCK2Q92563 424 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 SYMPKQ92797 1274 aaKnown RBP5.5□□□□□ -1.53
CDH17-201ENST00000027335 EPSTI1Q96J88 318 aa5.5□□□□□ -1.53
CDH17-201ENST00000027335 EP400Q96L91 3159 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 KCPQ6ZWJ8 1503 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 SCG2P13521 617 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 U2AF2P26368 475 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDH17-201ENST00000027335 FXR2P51116 673 aaKnown RBP eCLIP5.49□□□□□ -1.53
CDH17-201ENST00000027335 CHMP4BP1P59074 171 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 PLS1Q14651 629 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 SYCP1Q15431 976 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 WWC2Q6AWC2 1192 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 CTR9Q6PD62 1173 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 ADGRA1Q86SQ6 560 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 LRRC8AQ8IWT6 810 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 BLIDQ8IZY5 108 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 MLKLQ8NB16 471 aa5.49□□□□□ -1.53
CDH17-201ENST00000027335 TDRD7Q8NHU6 1098 aaKnown RBP5.49□□□□□ -1.53
CDH17-201ENST00000027335 SMARCC2Q8TAQ2 1214 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 173.2 ms