RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Snrnp35Q9D384 244 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ccdc89Q9DA73 370 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tob2Q9JM55 345 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Dpf1Q9QX66 387 aa10.8□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Scgb2b18A0A087WPA9 112 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Pfkfb3A7UAK5 555 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mars2Q499X9 586 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kiaa0319Q5SZV5 1081 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Glg1Q61543 1175 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mxd3Q80US8 206 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kctd3Q8BFX3 815 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Dclk3Q8BWQ5 790 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Traf3ip3Q8C0G2 513 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Eif4a3Q91VC3 411 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 HibadhQ99L13 335 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Psma7Q9Z2U0 248 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Apol6B7ZC55 329 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Pla2g4aP47713 748 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Slc12a2P55012 1205 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tubb4bP68372 445 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tubb5P99024 444 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 NeblQ0II04 452 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ccdc114Q3UX62 658 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Rexo1Q7TT28 1213 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Maip1Q8BHE8 291 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Yars2Q8BYL4 472 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ndufab1Q9CR21 156 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lman1Q9D0F3 517 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 RabggtaQ9JHK4 567 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Prpf40aQ9R1C7 953 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lgr5Q9Z1P4 907 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ssc5dQ8BV57 1371 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gm7356A0A087WSA6 508 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lrrc32G3XA59 663 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Prl2c3P04768 224 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Foxn3Q499D0 457 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kctd19Q562E2 927 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cacna2d4Q5RJF7 1116 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tbx2Q60707 711 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Naa15Q80UM3 865 aaKnown RBP10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ankrd13aQ80UP5 588 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Usp27Q8CEG8 438 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tmem60Q8K174 133 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 GlyctkQ8QZY2 523 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Uap1Q91YN5 522 aa10.79□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Proca1B0QZF7 307 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 GpiP06745 558 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Nkx2-5P42582 318 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Acot10Q32MW3 439 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 LrmpQ60664 539 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cct6bQ61390 531 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cep70Q6IQY5 616 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Smarca1Q6PGB8 1046 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ccdc25Q78PG9 208 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Lrrc1Q80VQ1 524 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tcp10aQ80W76 438 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Armcx3Q8BHS6 379 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ushbp1Q8R370 680 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Pcdhgc5Q91XW9 944 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 1700020D05RikQ99PB1 294 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 AacsQ9D2R0 672 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Alppl2P24823 529 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ric8aQ3TIR3 530 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Trappc10Q3TLI0 1259 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Epha10Q8BYG9 1007 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Tmem134Q8R0J4 195 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Ndufv1Q91YT0 464 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Glrx3Q9CQM9 337 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Zranb2Q9R020 330 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Kank3Q9Z1P7 791 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gdf11Q9Z1W4 405 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Unc13bQ9Z1N9 1602 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Cul4bA2A432 970 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Nap1l2P51860 460 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Siah1aP61092 282 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 NfixP70257 488 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Jade3Q6IE82 823 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 KhnynQ80U38 671 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 SowahdQ8BY98 327 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gtf2iQ9ESZ8 998 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Serpinc1P32261 465 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Fdx1P46656 188 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Gja3Q64448 417 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 PicalmQ7M6Y3 660 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Haus1Q8BHX1 278 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Phc3Q8CHP6 981 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 St5Q924W7 1134 aa10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Eif4enif1Q9EST3 983 aaKnown RBP10.78□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 DccP70211 1447 aa10.77□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Mrc1Q61830 1456 aa10.77□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Zfp142G5E869 1843 aa10.77□□□□□ -0.68
Pcdh1-201ENSMUST00000057185 Rexo5D3YW29 759 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Tal1P22091 329 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Sec23aQ01405 765 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccdc157Q5SPX1 718 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Ccpg1Q640L3 753 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Dhx37Q6NZL1 1150 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 SltmQ8CH25 1031 aaKnown RBP10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Q8K2W9 541 aa10.77□□□□□ -0.69
Pcdh1-201ENSMUST00000057185 Creb3l3Q91XE9 479 aa10.77□□□□□ -0.69
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms