RNA–Protein interactions for RNA: ENSMUST00000056508.11

Clcn3-202, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Clcn3, Length 5,684 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-202ENSMUST00000056508 Psmd9Q9CR00 222 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Trpc3Q9QZC1 836 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Srpk3Q9Z0G2 565 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Magea10A2AMW4 325 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ctnnd1P30999 938 aaKnown RBP9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 StamP70297 548 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Slc30a9Q5IRJ6 567 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ccdc157Q5SPX1 718 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pcp4l1Q6W8Q3 68 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 SargQ8BI29 606 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sgip1Q8VD37 806 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm28510A0A087WP28 240 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Zc3h12bG3X9I7 835 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm3043K7N693 218 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mx1P09922 631 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ap1g1P22892 822 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 CkbQ04447 381 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Q3UPC7 1272 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mcm7Q61881 719 aaKnown RBP9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ranbp6Q8BIV3 1105 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ubac1Q8VDI7 409 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HnrnprQ8VHM5 632 aaKnown RBP9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Inpp5dQ9ES52 1191 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gja10Q9WUS4 505 aa9.81□□□□□ -0.84
Clcn3-202ENSMUST00000056508 PargO88622 969 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Best1O88870 551 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Q3TYL0 343 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cct6bQ61390 531 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Trim6Q8BGE7 488 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 DseQ8BLI4 958 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dctn4Q8CBY8 467 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Slc8a2Q8K596 921 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ubxn2aQ99KJ0 258 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Krt23Q99PS0 422 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 DtnaQ9D2N4 746 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HnrnpcQ9Z204 313 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HnrnpfQ9Z2X1 415 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttc30a2A2AKQ8 664 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Eftud2O08810 971 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pja1O55176 578 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Clk1P22518 483 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ighmbp2P40694 993 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 B4galnt2Q09199 510 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Hipk4Q3V016 616 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ankrd13bQ5F259 626 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Hif1aQ61221 836 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Zfpm2Q8CCH7 1151 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 CopaQ8CIE6 1224 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Stn1Q8K2X3 378 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Bicd2Q921C5 820 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttc30a1Q99J38 664 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rbm43Q99J64 343 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ttc30bQ9CY00 664 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 CenppQ9CZ92 286 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Il20Q9JKV9 176 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gm30191A0A0U1RNT7 187 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Adcy1O88444 1118 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Krt4P07744 525 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 ZyxQ62523 564 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Cpa4Q6P8K8 420 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ireb2Q811J3 963 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fbxo30Q8BJL1 746 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Apol7cQ8C6E1 369 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sh3kbp1Q8R550 709 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Pip4k2cQ91XU3 421 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Edem1Q925U4 652 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Sugt1Q9CX34 336 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mxra7Q9CZH7 178 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 RtcAQ9D7H3 366 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Soat2O88908 525 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nxf2Q4ZGD8 691 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arl13bQ640N2 427 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ctdspl2Q8BG15 465 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 HpdlQ8K248 371 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Nmrk1Q91W63 195 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Fam212aQ9CX62 282 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 IkbipQ9DBZ1 373 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Gtf2iQ9ESZ8 998 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 StrapQ9Z1Z2 350 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mroh7A2AVR2 1279 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 MtrA6H5Y3 1253 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp2r3aB2RXC8 1150 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Serpinb3aG3X9V8 387 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tekt5G5E8A8 557 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 S100a9P31725 113 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Eef2kmtQ3UZW7 335 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Wdr91Q7TMQ7 748 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Bclaf1Q8K019 919 aaKnown RBP9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arhgef6Q8K4I3 771 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dact1Q8R4A3 778 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Rnf112Q96DY5 654 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dph5Q9CWQ0 281 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Krt16Q9Z2K1 469 aa9.8□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Clec3bP43025 202 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Arpc4P59999 168 aaKnown RBP9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Eif2b5Q8CHW4 717 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Ppp1r42Q8R1Z4 357 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Mul1Q8VCM5 352 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Dnajc14Q921R4 703 aa9.79□□□□□ -0.84
Clcn3-202ENSMUST00000056508 Tex12Q9CR81 123 aa9.79□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms