RNA–Protein interactions for RNA: ENSMUST00000050078.12

Sdf4-201, Transcript of 45 kDa calcium-binding protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdf4, Length 5,177 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4-201ENSMUST00000050078 Pagr1bF6V0H0 108 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Prkg1P0C605 671 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Lig3P97386 1015 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Kctd1Q5M956 257 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Wdr44Q6NVE8 915 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fbxo11Q7TPD1 930 aaKnown RBP13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Osbpl1aQ91XL9 950 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Synpo2Q91YE8 1087 aaKnown RBP13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pagr1aQ99L02 253 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Snrnp35Q9D384 244 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Mfap3lQ9D3X9 409 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cacna2d3Q9Z1L5 1091 aa13.71□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Lbhd1A0A087WPA0 259 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Zfp408H7BX78 710 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 NppbP40753 121 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Kcnf1Q7TSH7 493 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Csgalnact2Q8C1F4 542 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cyp2d11P24457 504 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Arid3aQ62431 601 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Stk38lQ7TSE6 464 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Prc1Q99K43 603 aaKnown RBP13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 SyncQ9EPM5 470 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 PtpruB1AUH1 1446 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Slc39a2G3X943 309 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Stmn2P55821 179 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Hps5P59438 1126 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Q3TTJ4 293 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm5592Q3V0A6 857 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Trmt44Q9D2Q2 713 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Rsrc1Q9DBU6 334 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cdk12Q14AX6 1484 aaKnown RBP13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tsr1Q5SWD9 803 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Meis1Q60954 390 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cct6bQ61390 531 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gigyf2Q6Y7W8 1291 aaKnown RBP13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fermt3Q8K1B8 665 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Dr1Q91WV0 176 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 PtprtQ99M80 1454 aa13.7□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fyb2A2A995 729 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ddx23D3Z0M9 819 aaKnown RBP13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cyp3a59D3Z2W7 503 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Mdh1P14152 334 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 IvlP48997 467 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Myef2Q8C854 591 aaKnown RBP13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Srgap2Q91Z67 1071 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Serpinb1cQ5SV42 375 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Clec16aQ80U30 1036 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pramel6Q810Y9 485 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Rassf10Q8BL43 508 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Vps52Q8C754 723 aaKnown RBP13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Trim68Q8K243 485 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Mettl14Q3UIK4 456 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Retreg2Q6NS82 541 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Hdac4Q6NZM9 1076 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Tmem132dQ76HP3 1097 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 MbipQ99LQ1 341 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Znf365Q8BG89 408 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ddx19bQ8BZY3 494 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ces1Q8VCC2 565 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Thap2Q9D305 217 aa13.69□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Traf1P39428 409 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Anks1aP59672 1150 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Dhx40Q6PE54 779 aaKnown RBP13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ube2oQ6ZPJ3 1288 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 LgsnQ8CIX8 563 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Atad3Q925I1 591 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gm4297D3YWB7 211 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Nmt2O70311 529 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pla2g4bP0C871 782 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Xrcc5P27641 732 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pabpn1lQ5XFR0 273 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cyp4x1Q6A152 507 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Adamts13Q769J6 1426 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Prdm11A2AGX3 565 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ccdc13D3YV10 709 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Camk4P08414 469 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gfpt1P47856 697 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Adcy8P97490 1249 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Rab34Q64008 259 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Crybg3Q80W49 1005 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ccdc169Q8BXX9 214 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Vps37bQ8R0J7 285 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 MlxiplQ99MZ3 864 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ndst4Q9EQW8 872 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Angptl3Q9R182 455 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Pcdha4O88689 947 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Lmnb2P21619 596 aaKnown RBP13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Slc38a10Q5I012 1090 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ddx31Q6NZQ2 687 aaKnown RBP13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Cep85Q8BMK0 761 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Q8CEZ4 452 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 AdarQ99MU3 1178 aaKnown RBP13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Fam133bQ9CVI2 245 aaKnown RBP13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Ltb4r2Q9JJL9 360 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Gja10Q9WUS4 505 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 GsdmeQ9Z2D3 512 aa13.68□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Art2bO35975 289 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Celf1P28659 486 aaKnown RBP13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Nek1P51954 1203 aa13.67□□□□□ -0.22
Sdf4-201ENSMUST00000050078 Stxbp3Q60770 592 aa13.67□□□□□ -0.22
Retrieved 100 of 22,080 RNA–protein pairs in 22.5 ms