RNA–Protein interactions for RNA: ENSMUST00000040182.12

Ccdc88a-201, Transcript of Girdin, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Ccdc88a, Length 9,376 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88a-201ENSMUST00000040182 Fam47cQ14BE7 430 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 Crybg3Q80W49 1005 aa18.02■□□□□ 0.48
Ccdc88a-201ENSMUST00000040182 GfapP03995 430 aa18.02■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pank4Q80YV4 820 aa18.02■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Mcf2A2AEU1 1111 aa18.02■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Abhd8Q8R0P8 439 aa18.02■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tmco4Q91WU4 631 aa18.02■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Casp14O89094 257 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Kif6E9PX57 802 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Atp6v1e1P50518 226 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Nxf2Q4ZGD8 691 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gnl3Q8CI11 538 aaKnown RBP18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Prpsap1Q9D0M1 356 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Snx1Q9WV80 522 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Slc8a3S4R2P9 928 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rps6ka5Q8C050 863 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 PdclQ9DBX2 301 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tmod1P49813 359 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Eya3P97480 510 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Kctd6Q8BNL5 237 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Plcg2Q8CIH5 1265 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pomgnt1Q91X88 660 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Desi2Q9D291 194 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rreb1Q3UH06 1700 aaKnown RBP18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gpc4P51655 557 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gimap7Q8R379 293 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Q9DAQ4 598 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Armc2Q3URY6 854 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pla2g4eQ50L42 875 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pcdhb12Q91Y07 789 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Galnt15Q9D2N8 638 aa18.01■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Cep85lA0A1W2P884 806 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Cd209bQ8CJ91 325 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Cuedc2Q9CXX9 284 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Iqcj-Schip1A0A088MLT8 559 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Schip1P0DPB4 484 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Hdac4Q6NZM9 1076 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 AmphQ7TQF7 686 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Q80ZQ3 298 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 MlklQ9D2Y4 472 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm43738A0A0G2JEA5 862 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gna15P30678 374 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm12185Q5NCB2 835 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Zbtb7bQ64321 544 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tfcp2Q9ERA0 502 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Tmod4Q9JLH8 345 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Arhgap42B2RQE8 841 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Plbd2Q3TCN2 594 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 AlcamQ61490 583 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Actn1Q7TPR4 892 aaKnown RBP18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rtl9Q32KG4 1339 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Spata31d1bE9QA57 1361 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Krt80Q0VBK2 452 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Nup160Q9Z0W3 1402 aaKnown RBP18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 1700029H14RikE9PY36 240 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ppp1r14cQ8R4S0 164 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Pcdha12Q91Y18 950 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Gm9774A0A0A6YVU8 407 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rasgrf1P27671 1262 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Lzts1P60853 599 aa18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 WaplQ65Z40 1200 aaKnown RBP18■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 YwhagP61982 247 aaKnown RBP17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 DSCC1Q14AI0 399 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sdr42e1Q9D665 394 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 AatfQ9JKX4 526 aaKnown RBP17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Dnaaf5B9EJR8 853 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sap30bpQ02614 308 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Cdc37Q61081 379 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Dnajc10Q9DC23 793 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sycp3P70281 254 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Srek1ip1Q4V9W2 153 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Rhobtb1Q9DAK3 695 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 BcrQ6PAJ1 1270 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Nod2Q8K3Z0 1020 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Mmrn2A6H6E2 943 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 XpcP51612 930 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Wdr70Q3TWF6 657 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Zbtb41Q811F1 908 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sgk1Q9WVC6 431 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ttc41Q692V3 1318 aa17.99■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Csgalnact2Q8C1F4 542 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Med7Q9CZB6 233 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Mtmr10Q7TPM9 771 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ube3bQ9ES34 1070 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sdccag3A2AIW0 432 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Esco1Q69Z69 843 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Stx19Q8R1Q0 292 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Nek8Q91ZR4 698 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ccdc194A0A140LIT1 234 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 FosP01101 380 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Casp2P29594 452 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Ephb4P54761 987 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Itih1Q61702 907 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 OcrlQ6NVF0 900 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Frmpd4A2AFR3 1320 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Mmrn1B2RPV6 1210 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Slc27a1Q60714 646 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Psmg1Q9JK23 289 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Sytl1Q99N80 567 aa17.98■□□□□ 0.47
Ccdc88a-201ENSMUST00000040182 Mdh1bQ5F204 500 aa17.98■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms