RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Ptger2Q62053 362 aa23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 NkrfQ8BY02 690 aaKnown RBP23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Gpcpd1Q8C0L9 675 aa23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 ImmtQ8CAQ8 757 aaKnown RBP23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 NkapQ9D0F4 415 aaKnown RBP23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 PolkQ9QUG2 852 aa23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Zscan4-ps1A0A1C7CYV3 506 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Mx1P09922 631 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Gp6P0C191 313 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Lman2lP59481 347 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Rps6P62754 249 aaKnown RBP23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Ece1Q4PZA2 769 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Etaa1Q5SVT3 877 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Moxd2Q7TT41 619 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Phf24Q80TL4 400 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Kiaa1524Q8BWY9 907 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Depdc1aQ8CIG0 804 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Stard7Q8R1R3 373 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Q9D2X8 372 aa23.45■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Slc6a21A0A1B0GSD2 748 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Hcn4O70507 1186 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 LrmpQ60664 539 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Churc1Q6DG52 112 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Ppp2r5bQ6PD28 497 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Agbl2Q8CDK2 862 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Rassf8Q8CJ96 419 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Serpinb3bQ9D1Q5 387 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Ubiad1Q9DC60 336 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Cdc42ep5Q9Z0X0 150 aa23.44■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 R3hdm1E9Q9Q2 1135 aaKnown RBP23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Lipo1J3QME6 396 aa23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Esyt1Q3U7R1 1092 aaKnown RBP23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Clca4aQ6Q473 924 aa23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Mrpl11Q9CQF0 192 aaKnown RBP23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Azi2Q9QYP6 405 aa23.43■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Usp42B2RQC2 1324 aaKnown RBP23.42■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 JcadQ5DTX6 1320 aa23.42■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Lrrc14bQ3UJB3 510 aa23.42■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Prdm1Q60636 856 aa23.42■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Slc9a7Q8BLV3 726 aa23.42■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Kif26aQ52KG5 1881 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Mt-CybP00158 381 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Inpp5jP59644 1003 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Sec23aQ01405 765 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Siah1bQ06985 282 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Myl10Q62082 202 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Lca5Q80ST9 704 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 3830417A13RikQ8BQJ2 303 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Smad3Q8BUN5 425 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Tmc1Q8R4P5 757 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Dusp6Q9DBB1 381 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Inpp4aQ9EPW0 939 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 PalmdQ9JHU2 551 aa23.41■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Jakmip2D3YXK0 820 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 LdhaP06151 332 aaKnown RBP23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Aldh1a1P24549 501 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Lilrb3P97484 841 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Elf1Q60775 612 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 PigsQ6PD26 555 aaKnown RBP23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Slc44a1Q6X893 653 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Terb1Q8C0V1 768 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Ppp2r3dQ9Z176 491 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Fem1bQ9Z2G0 627 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Piezo1E2JF22 2547 aa23.4■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Myh8P13542 1937 aa23.39■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Col5a3Q9JLI2 1739 aa23.39■■□□□ 1.34
Ttc39b-201ENSMUST00000030205 Metap2O08663 478 aaKnown RBP23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 GaaP70699 953 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Znf800Q0VEE6 662 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Mdh1bQ5F204 500 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Trim37Q6PCX9 961 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Ssh1Q76I79 1042 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Dbr1Q923B1 550 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Xpo5Q924C1 1204 aaKnown RBP23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Ggps1Q9WTN0 300 aa23.39■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 1110002E22RikE0CYV9 1786 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 C87977A2A958 498 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Wdr63B2RY71 923 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Gcnt4E9Q649 455 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 StrnO55106 780 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Hoxa11P31311 313 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Dnajc2P54103 621 aaKnown RBP23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Fbln1Q08879 705 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Fam189a2Q4FZH1 290 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Gas6Q61592 674 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Ece2Q80Z60 881 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 1700001K19RikQ80ZT1 219 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Usp44Q8C2S0 711 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Atl3Q91YH5 541 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Cmtm5Q9D6G9 156 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Arid3bQ9Z1N7 568 aa23.38■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 BC025446A0A087WQT1 134 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Vwa3bJ9JI28 736 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Stag2O35638 1231 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 FpgsP48760 587 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Psmc6P62334 389 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Entpd7Q3TCT4 606 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 A1cfQ5YD48 595 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Gga3Q8BMI3 718 aa23.37■■□□□ 1.33
Ttc39b-201ENSMUST00000030205 Top1mtQ8R4U6 593 aa23.37■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 17.9 ms