RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 MbipQ99LQ1 341 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Akap8Q9DBR0 687 aaKnown RBP12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tnip1Q9WUU8 647 aa12.04□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm3893E9Q1I1 302 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Npy5rO70342 466 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 CrkQ64010 304 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Q8VDP2 222 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ttll1Q91V51 423 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Coro7Q9D2V7 922 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Slit1Q80TR4 1531 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Ccdc24E9PUW8 296 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tdo2P48776 406 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rapgef1Q3UHC1 1224 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tbc1d9bQ5SVR0 1263 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 EsrrbQ61539 433 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Defb15Q8R2I5 79 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Prkab1Q9R078 270 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Prr7Q3V0I2 269 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Mybpc2Q5XKE0 1136 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Meis1Q60954 390 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Slc9a1Q61165 820 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 PigsQ6PD26 555 aaKnown RBP12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tubb2aQ7TMM9 445 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Rexo1Q7TT28 1213 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cplx4Q80WM3 160 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fermt2Q8CIB5 680 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gpr108Q91WD0 569 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Prpf3Q922U1 683 aaKnown RBP12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Tubb2bQ9CWF2 445 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 SarnpQ9D1J3 210 aaKnown RBP12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Klc4Q9DBS5 619 aa12.03□□□□□ -0.48
Msh3-201ENSMUST00000022220 Pde4aO89084 844 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Psmc2P46471 433 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cct6aP80317 531 aaKnown RBP12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Scg2Q03517 617 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fam198bQ3UPI1 517 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Cyp7b1Q60991 507 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Krt9Q6RHW0 743 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Asic3Q6X1Y6 530 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Fbxo11Q7TPD1 930 aaKnown RBP12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Vmn1r199Q8R280 367 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 WaslQ91YD9 501 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Lzts2Q91YU6 671 aa12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Uso1Q9Z1Z0 959 aaKnown RBP12.02□□□□□ -0.48
Msh3-201ENSMUST00000022220 Gm7356A0A087WSA6 508 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ankrd35E9Q9D8 996 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ttbk2Q3UVR3 1243 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 WaplQ65Z40 1200 aaKnown RBP12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pcdhb14Q6PB90 796 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Prkag3Q8BGM7 489 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Cep85Q8BMK0 761 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Eif3cQ8R1B4 911 aaKnown RBP12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Olr1Q9EQ09 363 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Kif23E9Q5G3 953 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Grin1P35438 938 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Senp6Q6P7W0 1132 aa12.02□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pdrg1P59048 133 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Hdhd2Q3UGR5 259 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rassf2Q8BMS9 326 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Iqcb1Q8BP00 598 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Apol10aQ8CCA5 318 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Atxn7Q8R4I1 867 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ciapin1Q8WTY4 309 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Armc9Q9D2I5 817 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ubxn8Q9QZ49 277 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ubr1O70481 1757 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Gm28510A0A087WP28 240 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rsrc2A2RTL5 376 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Krt78E9Q0F0 1068 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Tcp11l2Q8K1H7 517 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Kctd10Q922M3 315 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Trim59Q922Y2 403 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 AvenQ9D9K3 342 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Prpf40aQ9R1C7 953 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Glt1d1A4FUP9 346 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Flot1O08917 428 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Mnat1P51949 309 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rnf216P58283 853 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Hmgb1P63158 215 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 NntQ61941 1086 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 LgsnQ8CIX8 563 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 SnrkQ8VDU5 748 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Yipf1Q91VU1 306 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Rrp1bQ91YK2 724 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Cfap53Q9D439 514 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 4921524L21RikQ9D5T2 438 aa12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Telo2Q9DC40 840 aaKnown RBP12.01□□□□□ -0.49
Msh3-201ENSMUST00000022220 Prss51A0A286YDY8 319 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Skor2A7M7C7 1008 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 RubcnlQ3TD16 648 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Glis3Q6XP49 780 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Lrrc1Q80VQ1 524 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 GzmnQ920S1 248 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Kif17Q99PW8 1038 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Sar1bQ9CQC9 198 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Ccdc189Q6NZQ0 333 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Naa25Q8BWZ3 972 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Q8C1R3 189 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Appl2Q8K3G9 662 aa12□□□□□ -0.49
Msh3-201ENSMUST00000022220 Pcdha7Q91Y13 937 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 16.7 ms