RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B ENP1P38333 483 aaKnown RBP0.61□□□□□ -2.31
snR39BsnR39B RCK2P38623 610 aa0.61□□□□□ -2.31
snR39BsnR39B LAG1P38703 411 aa0.61□□□□□ -2.31
snR39BsnR39B VPS52P39904 641 aa0.61□□□□□ -2.31
snR39BsnR39B FMP10P40098 244 aa0.61□□□□□ -2.31
snR39BsnR39B YFR020WP43600 232 aa0.61□□□□□ -2.31
snR39BsnR39B YJR142WP47173 342 aa0.61□□□□□ -2.31
snR39BsnR39B AIM32Q04689 311 aa0.61□□□□□ -2.31
snR39BsnR39B VPS74Q06385 345 aa0.61□□□□□ -2.31
snR39BsnR39B CRN1Q06440 651 aa0.61□□□□□ -2.31
snR39BsnR39B NUR1Q12066 484 aa0.61□□□□□ -2.31
snR39BsnR39B RFM1Q12192 310 aa0.61□□□□□ -2.31
snR39BsnR39B INP53Q12271 1107 aa0.61□□□□□ -2.31
snR39BsnR39B CTF3Q12748 733 aa0.61□□□□□ -2.31
snR39BsnR39B KAR1P11927 433 aa0.6□□□□□ -2.31
snR39BsnR39B SPE2P21182 396 aa0.6□□□□□ -2.31
snR39BsnR39B SIR1P21691 654 aa0.6□□□□□ -2.31
snR39BsnR39B SWI4P25302 1093 aaKnown RBP0.6□□□□□ -2.31
snR39BsnR39B NUP120P35729 1037 aa0.6□□□□□ -2.31
snR39BsnR39B YKL050CP35736 922 aa0.6□□□□□ -2.31
snR39BsnR39B ARA1P38115 344 aa0.6□□□□□ -2.31
snR39BsnR39B STT3P39007 718 aaKnown RBP0.6□□□□□ -2.31
snR39BsnR39B YIL067CP40514 678 aa0.6□□□□□ -2.31
snR39BsnR39B PKP1P40530 394 aa0.6□□□□□ -2.31
snR39BsnR39B CTF18P49956 741 aa0.6□□□□□ -2.31
snR39BsnR39B CEG1Q01159 459 aaPredicted RBP0.6□□□□□ -2.31
snR39BsnR39B SYO1Q07395 620 aa0.6□□□□□ -2.31
snR39BsnR39B TRE2Q08693 809 aa0.6□□□□□ -2.31
snR39BsnR39B HXK2P04807 486 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B ADE3P07245 946 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B SNF3P10870 884 aa0.59□□□□□ -2.31
snR39BsnR39B EXO70P19658 623 aa0.59□□□□□ -2.31
snR39BsnR39B LCB1P25045 558 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B DAL2P25335 343 aa0.59□□□□□ -2.31
snR39BsnR39B PGS1P25578 521 aa0.59□□□□□ -2.31
snR39BsnR39B CDC15P27636 974 aa0.59□□□□□ -2.31
snR39BsnR39B ARP2P32381 391 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B KKQ8P36004 724 aa0.59□□□□□ -2.31
snR39BsnR39B ROT2P38138 954 aa0.59□□□□□ -2.31
snR39BsnR39B OSH3P38713 996 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B CAF40P53829 373 aa0.59□□□□□ -2.31
snR39BsnR39B DIA1P54005 336 aa0.59□□□□□ -2.31
snR39BsnR39B RLI1Q03195 608 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B EIS1Q05050 843 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B HRI1Q05905 244 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B MRPL51Q06090 140 aaPredicted RBP0.59□□□□□ -2.31
snR39BsnR39B MLC2Q06580 163 aa0.59□□□□□ -2.31
snR39BsnR39B TSR1Q07381 788 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B RRP6Q12149 733 aaKnown RBP0.59□□□□□ -2.31
snR39BsnR39B HIP1P06775 603 aa0.58□□□□□ -2.32
snR39BsnR39B APE1P14904 514 aa0.58□□□□□ -2.32
snR39BsnR39B PFK2P16862 959 aaKnown RBP RIP-Chip data0.58□□□□□ -2.32not detected
snR39BsnR39B RIT1P23796 513 aa0.58□□□□□ -2.32
snR39BsnR39B CPR4P25334 318 aa0.58□□□□□ -2.32
snR39BsnR39B TFC3P34111 1160 aa0.58□□□□□ -2.32
snR39BsnR39B PIM1P36775 1133 aa0.58□□□□□ -2.32
snR39BsnR39B MRPS9P38120 278 aa0.58□□□□□ -2.32
snR39BsnR39B ELP2P42935 788 aa0.58□□□□□ -2.32
snR39BsnR39B MAD3P47074 515 aa0.58□□□□□ -2.32
snR39BsnR39B ALT2P52892 507 aa0.58□□□□□ -2.32
snR39BsnR39B CNM67P53865 581 aaKnown RBP0.58□□□□□ -2.32
snR39BsnR39B INN1P53901 409 aa0.58□□□□□ -2.32
snR39BsnR39B RHO4Q00246 291 aa0.58□□□□□ -2.32
snR39BsnR39B YVH1Q02256 364 aaKnown RBP0.58□□□□□ -2.32
snR39BsnR39B ATG9Q12142 997 aa0.58□□□□□ -2.32
snR39BsnR39B NKP1Q12493 238 aa0.58□□□□□ -2.32
snR39BsnR39B ARG81P05085 880 aa0.57□□□□□ -2.32
snR39BsnR39B CHS1P08004 1131 aa0.57□□□□□ -2.32
snR39BsnR39B NCP1P16603 691 aaKnown RBP0.57□□□□□ -2.32
snR39BsnR39B YBR071WP38243 211 aa0.57□□□□□ -2.32
snR39BsnR39B FSH1P38777 243 aaKnown RBP0.57□□□□□ -2.32
snR39BsnR39B HAT2P39984 401 aa0.57□□□□□ -2.32
snR39BsnR39B YJR120WP47157 116 aa0.57□□□□□ -2.32
snR39BsnR39B PYK2P52489 506 aaKnown RBP0.57□□□□□ -2.32
snR39BsnR39B IMA1P53051 589 aa0.57□□□□□ -2.32
snR39BsnR39B TOF1P53840 1238 aa0.57□□□□□ -2.32
snR39BsnR39B IBD2P53892 351 aa0.57□□□□□ -2.32
snR39BsnR39B IRC15Q02733 499 aa0.57□□□□□ -2.32
snR39BsnR39B BNA5Q05979 453 aa0.57□□□□□ -2.32
snR39BsnR39B CFT2Q12102 859 aaPredicted RBP0.57□□□□□ -2.32
snR39BsnR39B YLR108CQ12259 485 aa0.57□□□□□ -2.32
snR39BsnR39B ARP7Q12406 477 aa0.57□□□□□ -2.32
snR39BsnR39B YTA7P40340 1379 aa0.57□□□□□ -2.32
snR39BsnR39B PUT2P07275 575 aa0.56□□□□□ -2.32
snR39BsnR39B DUG2P38149 878 aa0.56□□□□□ -2.32
snR39BsnR39B APM3P38153 483 aa0.56□□□□□ -2.32
snR39BsnR39B VID24P38263 362 aa0.56□□□□□ -2.32
snR39BsnR39B PAN6P40459 309 aa0.56□□□□□ -2.32
snR39BsnR39B ERR3P42222 437 aa0.56□□□□□ -2.32
snR39BsnR39B RPS10BP46784 105 aaKnown RBP0.56□□□□□ -2.32
snR39BsnR39B DPB11P47027 764 aaPredicted RBP0.56□□□□□ -2.32
snR39BsnR39B YNR061CP53747 219 aa0.56□□□□□ -2.32
snR39BsnR39B COG6P53959 839 aa0.56□□□□□ -2.32
snR39BsnR39B ZDS2P54786 942 aa0.56□□□□□ -2.32
snR39BsnR39B YPL014WQ02606 381 aa0.56□□□□□ -2.32
snR39BsnR39B RPC11Q04307 110 aaPredicted RBP0.56□□□□□ -2.32
snR39BsnR39B PHM6Q05637 104 aa0.56□□□□□ -2.32
snR39BsnR39B IWR1Q07532 353 aaPredicted RBP0.56□□□□□ -2.32
snR39BsnR39B RPS10AQ08745 105 aaPredicted RBP0.56□□□□□ -2.32
snR39BsnR39B MIS1P09440 975 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 17.9 ms