RNA–Protein interactions for RNA: YPL085W

SEC16, Transcript of COPII vesicle coat protein required for ER transport vesicle budding, yeastyeast

Gene SEC16, Length 6,588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC16YPL085W APL4Q12028 832 aa2.2□□□□□ -2.06
SEC16YPL085W TFC8Q12308 588 aa2.2□□□□□ -2.06
SEC16YPL085W INH1P01097 85 aa2.2□□□□□ -2.06
SEC16YPL085W MSS18P08593 268 aa2.2□□□□□ -2.06
SEC16YPL085W RRP7P25368 297 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W SPR1P32603 445 aa2.2□□□□□ -2.06
SEC16YPL085W NIC96P34077 839 aa2.2□□□□□ -2.06
SEC16YPL085W MNN2P38069 597 aa2.2□□□□□ -2.06
SEC16YPL085W CTP1P38152 299 aa2.2□□□□□ -2.06
SEC16YPL085W GOS1P38736 223 aa2.2□□□□□ -2.06
SEC16YPL085W YHL026CP38740 315 aa2.2□□□□□ -2.06
SEC16YPL085W NEM1P38757 446 aa2.2□□□□□ -2.06
SEC16YPL085W TRM5P38793 499 aa2.2□□□□□ -2.06
SEC16YPL085W BFR1P38934 470 aaKnown RBP RIP-Chip data2.2□□□□□ -2.06 RIP-Chip
SEC16YPL085W MET30P39014 640 aa2.2□□□□□ -2.06
SEC16YPL085W FCY21P40039 528 aa2.2□□□□□ -2.06
SEC16YPL085W ASG1P40467 964 aa2.2□□□□□ -2.06
SEC16YPL085W AYR1P40471 297 aa2.2□□□□□ -2.06
SEC16YPL085W AXL1P40851 1208 aa2.2□□□□□ -2.06
SEC16YPL085W FOL2P51601 243 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W MTC3P53077 123 aa2.2□□□□□ -2.06
SEC16YPL085W SMX3P54999 86 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W RHO3Q00245 231 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W YDR018CQ12185 396 aa2.2□□□□□ -2.06
SEC16YPL085W YKL068W-AQ3E826 78 aa2.2□□□□□ -2.06
SEC16YPL085W NAR1P23503 491 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W PUP3P25451 205 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W AAD3P25612 363 aa2.2□□□□□ -2.06
SEC16YPL085W PAP1P29468 568 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W NTH1P32356 751 aa2.2□□□□□ -2.06
SEC16YPL085W MIA40P36046 403 aa2.2□□□□□ -2.06
SEC16YPL085W UBS1P38290 277 aa2.2□□□□□ -2.06
SEC16YPL085W MTW1P39731 289 aa2.2□□□□□ -2.06
SEC16YPL085W KRE29P40026 464 aa2.2□□□□□ -2.06
SEC16YPL085W PDS1P40316 373 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W TDA10P42938 290 aa2.2□□□□□ -2.06
SEC16YPL085W POL31P46957 487 aa2.2□□□□□ -2.06
SEC16YPL085W LOH1P47055 219 aa2.2□□□□□ -2.06
SEC16YPL085W GCV2P49095 1034 aa2.2□□□□□ -2.06
SEC16YPL085W PRP31P49704 494 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W EXG2P52911 562 aa2.2□□□□□ -2.06
SEC16YPL085W SWC4P53201 476 aa2.2□□□□□ -2.06
SEC16YPL085W HXT11P54862 567 aa2.2□□□□□ -2.06
SEC16YPL085W PPM1Q04081 328 aa2.2□□□□□ -2.06
SEC16YPL085W GMC2Q06201 188 aa2.2□□□□□ -2.06
SEC16YPL085W VAM6Q07468 1049 aa2.2□□□□□ -2.06
SEC16YPL085W YLR030WQ07967 263 aa2.2□□□□□ -2.06
SEC16YPL085W RTT10Q08924 1013 aa2.2□□□□□ -2.06
SEC16YPL085W LEA1Q08963 238 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W RKM5Q12367 367 aa2.2□□□□□ -2.06
SEC16YPL085W RRI1Q12468 440 aa2.2□□□□□ -2.06
SEC16YPL085W PAR32Q12515 295 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W RRP5Q05022 1729 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W COX3P00420 269 aa2.2□□□□□ -2.06
SEC16YPL085W YKR104WP0CE69 306 aa2.2□□□□□ -2.06
SEC16YPL085W NAM2P11325 894 aa2.2□□□□□ -2.06
SEC16YPL085W REV1P12689 985 aa2.2□□□□□ -2.06
SEC16YPL085W CAD1P24813 409 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W RAD57P25301 460 aa2.2□□□□□ -2.06
SEC16YPL085W MVD1P32377 396 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W RIB1P38066 345 aa2.2□□□□□ -2.06
SEC16YPL085W PTC4P38089 393 aa2.2□□□□□ -2.06
SEC16YPL085W LRP1P38801 184 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W PFK26P40433 827 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W UTP25P40498 721 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W CHS6P40955 746 aa2.2□□□□□ -2.06
SEC16YPL085W RPE1P46969 238 aa2.2□□□□□ -2.06
SEC16YPL085W BNA3P47039 444 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W LCL3P53153 274 aa2.2□□□□□ -2.06
SEC16YPL085W YGR168CP53293 376 aa2.2□□□□□ -2.06
SEC16YPL085W YNL144CP53907 740 aa2.2□□□□□ -2.06
SEC16YPL085W RVB1Q03940 463 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W ECM18Q04623 453 aa2.2□□□□□ -2.06
SEC16YPL085W YPR027CQ12079 277 aa2.2□□□□□ -2.06
SEC16YPL085W ERP3Q12403 225 aa2.2□□□□□ -2.06
SEC16YPL085W MHF1Q3E835 90 aa2.2□□□□□ -2.06
SEC16YPL085W CHO2P05374 869 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W RPS5P26783 225 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W SRY1P36007 326 aa2.2□□□□□ -2.06
SEC16YPL085W DUN1P39009 513 aa2.2□□□□□ -2.06
SEC16YPL085W MEF2P39677 819 aa2.2□□□□□ -2.06
SEC16YPL085W LCB2P40970 561 aa2.2□□□□□ -2.06
SEC16YPL085W MNP1P53163 194 aaPredicted RBP2.2□□□□□ -2.06
SEC16YPL085W TDA5Q06417 326 aaKnown RBP2.2□□□□□ -2.06
SEC16YPL085W YDL086WQ07505 273 aa2.2□□□□□ -2.06
SEC16YPL085W NMD4Q12129 218 aa2.2□□□□□ -2.06
SEC16YPL085W RPS17AP02407 136 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W DED1P06634 604 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W TY2A-LR1P0C2J4 438 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-FP0CX61 438 aa2.19□□□□□ -2.06
SEC16YPL085W TY2A-GR2P0CX62 438 aa2.19□□□□□ -2.06
SEC16YPL085W HSF1P10961 833 aa2.19□□□□□ -2.06
SEC16YPL085W RPS17BP14127 136 aaKnown RBP2.19□□□□□ -2.06
SEC16YPL085W TY2A-CP25383 438 aa2.19□□□□□ -2.06
SEC16YPL085W MGT1P26188 188 aa2.19□□□□□ -2.06
SEC16YPL085W CHS3P29465 1165 aa2.19□□□□□ -2.06
SEC16YPL085W GDA1P32621 518 aa2.19□□□□□ -2.06
SEC16YPL085W HCS1P34243 683 aa2.19□□□□□ -2.06
SEC16YPL085W COS111P38308 924 aa2.19□□□□□ -2.06
SEC16YPL085W YHR020WP38708 688 aaKnown RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms