RNA–Protein interactions for RNA: YPL084W

BRO1, Transcript of Cytoplasmic class E vacuolar protein sorting (VPS) factor, yeastyeast

Gene BRO1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRO1YPL084W MRP13P12686 339 aa2.45□□□□□ -2.02
BRO1YPL084W OCA4P25366 362 aa2.45□□□□□ -2.02
BRO1YPL084W TIF3P34167 436 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W YBL055CP34220 418 aaPredicted RBP2.45□□□□□ -2.02
BRO1YPL084W SEF1P34228 1148 aa2.45□□□□□ -2.02
BRO1YPL084W YMR124WP39523 943 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W YEL057CP39983 233 aa2.45□□□□□ -2.02
BRO1YPL084W ALG5P40350 334 aa2.45□□□□□ -2.02
BRO1YPL084W HOS2P53096 452 aaPredicted RBP2.45□□□□□ -2.02
BRO1YPL084W YGR066CP53242 292 aa2.45□□□□□ -2.02
BRO1YPL084W YNL234WP53857 426 aa2.45□□□□□ -2.02
BRO1YPL084W IZH1Q03419 316 aa2.45□□□□□ -2.02
BRO1YPL084W TAF11Q04226 346 aa2.45□□□□□ -2.02
BRO1YPL084W UTP21Q06078 939 aaPredicted RBP2.45□□□□□ -2.02
BRO1YPL084W YDL218WQ07629 317 aa2.45□□□□□ -2.02
BRO1YPL084W RPL42AP0CX27 106 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W RPL42BP0CX28 106 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W SNF3P10870 884 aa2.45□□□□□ -2.02
BRO1YPL084W CKA1P15790 372 aa2.45□□□□□ -2.02
BRO1YPL084W PDA1P16387 420 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W BOS1P25385 244 aa2.45□□□□□ -2.02
BRO1YPL084W YKL100CP34248 587 aa2.45□□□□□ -2.02
BRO1YPL084W NUP133P36161 1157 aa2.45□□□□□ -2.02
BRO1YPL084W LEU5P38702 357 aa2.45□□□□□ -2.02
BRO1YPL084W IMD4P50094 524 aaKnown RBP2.45□□□□□ -2.02
BRO1YPL084W MRPL1Q04599 285 aa2.45□□□□□ -2.02
BRO1YPL084W PUF2Q12221 1075 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02 RIP-Chip
BRO1YPL084W HSH49Q99181 213 aaPredicted RBP2.45□□□□□ -2.02
BRO1YPL084W EDE1P34216 1381 aa2.45□□□□□ -2.02
BRO1YPL084W FOB1O13329 566 aa2.44□□□□□ -2.02
BRO1YPL084W AIM17P23180 465 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W GAC1P28006 793 aa2.44□□□□□ -2.02
BRO1YPL084W TCD2P36101 447 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W RPL32P38061 130 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W YIR016WP40572 265 aa2.44□□□□□ -2.02
BRO1YPL084W PKP2P53170 491 aa2.44□□□□□ -2.02
BRO1YPL084W CTL1Q03220 320 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W PUT2P07275 575 aa2.44□□□□□ -2.02
BRO1YPL084W DFR1P07807 211 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
BRO1YPL084W ART10P18634 518 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W YCP4P25349 247 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W MGM1P32266 881 aa2.44□□□□□ -2.02
BRO1YPL084W MPE1P35728 441 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W YPT53P36019 220 aa2.44□□□□□ -2.02
BRO1YPL084W ROT2P38138 954 aa2.44□□□□□ -2.02
BRO1YPL084W GND1P38720 489 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W UBA4P38820 440 aa2.44□□□□□ -2.02
BRO1YPL084W MET28P40573 187 aa2.44□□□□□ -2.02
BRO1YPL084W APT1P49435 187 aaKnown RBP2.44□□□□□ -2.02
BRO1YPL084W YLR287CQ05881 355 aa2.44□□□□□ -2.02
BRO1YPL084W RLM1Q12224 676 aa2.44□□□□□ -2.02
BRO1YPL084W AVL9Q12500 764 aa2.44□□□□□ -2.02
BRO1YPL084W YPT1P01123 206 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W BUD5P25300 642 aaPredicted RBP2.43□□□□□ -2.02
BRO1YPL084W PCI8P40512 444 aa2.43□□□□□ -2.02
BRO1YPL084W MDV1P47025 714 aa2.43□□□□□ -2.02
BRO1YPL084W PYK2P52489 506 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W MSC1Q03104 513 aa2.43□□□□□ -2.02
BRO1YPL084W YDR239CQ03780 787 aa2.43□□□□□ -2.02
BRO1YPL084W SYF1Q04048 859 aaPredicted RBP2.43□□□□□ -2.02
BRO1YPL084W ETT1Q08421 412 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W RDR1Q08904 546 aa2.43□□□□□ -2.02
BRO1YPL084W RED1P14291 827 aa2.43□□□□□ -2.02
BRO1YPL084W PDR3P33200 976 aa2.43□□□□□ -2.02
BRO1YPL084W WBP1P33767 430 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W MTR2P34232 184 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W SCW4P53334 386 aaKnown RBP2.43□□□□□ -2.02
BRO1YPL084W DUG3P53871 357 aa2.43□□□□□ -2.02
BRO1YPL084W EKI1Q03764 534 aa2.43□□□□□ -2.02
BRO1YPL084W YDL057WQ07379 328 aa2.43□□□□□ -2.02
BRO1YPL084W CDC45Q08032 650 aa2.43□□□□□ -2.02
BRO1YPL084W RIM20Q12033 661 aa2.43□□□□□ -2.02
BRO1YPL084W ROX1P25042 368 aa2.42□□□□□ -2.02
BRO1YPL084W MSR1P38714 643 aa2.42□□□□□ -2.02
BRO1YPL084W ROK1P45818 564 aaPredicted RBP2.42□□□□□ -2.02
BRO1YPL084W ESBP6P53918 673 aa2.42□□□□□ -2.02
BRO1YPL084W YVH1Q02256 364 aaKnown RBP2.42□□□□□ -2.02
BRO1YPL084W NUP100Q02629 959 aa2.42□□□□□ -2.02
BRO1YPL084W COQ9Q05779 260 aa2.42□□□□□ -2.02
BRO1YPL084W ECI1Q05871 280 aa2.42□□□□□ -2.02
BRO1YPL084W GEP3Q08622 556 aa2.42□□□□□ -2.02
BRO1YPL084W RRG1Q12167 365 aaPredicted RBP2.42□□□□□ -2.02
BRO1YPL084W FUR1P18562 216 aaKnown RBP2.42□□□□□ -2.02
BRO1YPL084W GPI10P30777 616 aa2.42□□□□□ -2.02
BRO1YPL084W YME1P32795 747 aa2.42□□□□□ -2.02
BRO1YPL084W ASK1P35734 292 aa2.42□□□□□ -2.02
BRO1YPL084W CST26P38226 397 aa2.42□□□□□ -2.02
BRO1YPL084W VID24P38263 362 aa2.42□□□□□ -2.02
BRO1YPL084W SPC97P38863 823 aa2.42□□□□□ -2.02
BRO1YPL084W UTP9P38882 575 aaKnown RBP2.42□□□□□ -2.02
BRO1YPL084W PHO90P39535 881 aa2.42□□□□□ -2.02
BRO1YPL084W PET130P47065 347 aa2.42□□□□□ -2.02
BRO1YPL084W SOL4P53315 255 aa2.42□□□□□ -2.02
BRO1YPL084W BOP3P53958 396 aa2.42□□□□□ -2.02
BRO1YPL084W AFT2Q08957 416 aa2.42□□□□□ -2.02
BRO1YPL084W UBX3Q12229 455 aa2.42□□□□□ -2.02
BRO1YPL084W YPK3P38070 525 aa2.41□□□□□ -2.02
BRO1YPL084W CIN4P39110 191 aa2.41□□□□□ -2.02
BRO1YPL084W MET18P40469 1032 aa2.41□□□□□ -2.02
BRO1YPL084W SNG1P46950 547 aa2.41□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms