RNA–Protein interactions for RNA: YOR247W

SRL1, Transcript of Mannoprotein that exhibits a tight association with the cell wall, yeastyeast

Gene SRL1, Length 633 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SRL1YOR247W LRP1P38801 184 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W CIN4P39110 191 aa3.29□□□□□ -1.88
SRL1YOR247W IRC7P43623 340 aa3.29□□□□□ -1.88
SRL1YOR247W APT1P49435 187 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W IMD3P50095 523 aaKnown RBP3.29□□□□□ -1.88
SRL1YOR247W MNP1P53163 194 aaPredicted RBP3.29□□□□□ -1.88
SRL1YOR247W SWF1Q04629 336 aa3.29□□□□□ -1.88
SRL1YOR247W ORM2Q06144 216 aa3.29□□□□□ -1.88
SRL1YOR247W ECM30Q06673 1274 aa3.29□□□□□ -1.88
SRL1YOR247W TEN1Q07921 160 aa3.29□□□□□ -1.88
SRL1YOR247W YOL159C-AQ3E769 90 aa3.29□□□□□ -1.88
SRL1YOR247W SGS1P35187 1447 aa3.28□□□□□ -1.88
SRL1YOR247W YML133CQ03099 1374 aa3.28□□□□□ -1.88
SRL1YOR247W YLL067CQ07888 1374 aa3.28□□□□□ -1.88
SRL1YOR247W YLL066CQ99208 1374 aa3.28□□□□□ -1.88
SRL1YOR247W CHO1P08456 276 aa3.28□□□□□ -1.88
SRL1YOR247W MRP13P12686 339 aa3.28□□□□□ -1.88
SRL1YOR247W URE2P23202 354 aaKnown RBP3.28□□□□□ -1.88
SRL1YOR247W BUD5P25300 642 aaPredicted RBP3.28□□□□□ -1.88
SRL1YOR247W STE50P25344 346 aa3.28□□□□□ -1.88
SRL1YOR247W PPZ2P33329 710 aa3.28□□□□□ -1.88
SRL1YOR247W HCS1P34243 683 aa3.28□□□□□ -1.88
SRL1YOR247W GCS1P35197 352 aa3.28□□□□□ -1.88
SRL1YOR247W MIA40P36046 403 aa3.28□□□□□ -1.88
SRL1YOR247W HOT13P36078 116 aa3.28□□□□□ -1.88
SRL1YOR247W STB6P36085 766 aa3.28□□□□□ -1.88
SRL1YOR247W NUP133P36161 1157 aa3.28□□□□□ -1.88
SRL1YOR247W RPL32P38061 130 aaKnown RBP3.28□□□□□ -1.88
SRL1YOR247W ERV46P39727 415 aa3.28□□□□□ -1.88
SRL1YOR247W JEM1P40358 645 aa3.28□□□□□ -1.88
SRL1YOR247W CDC1P40986 491 aa3.28□□□□□ -1.88
SRL1YOR247W YJL107CP42947 387 aa3.28□□□□□ -1.88
SRL1YOR247W STB2P46679 850 aa3.28□□□□□ -1.88
SRL1YOR247W DLD2P46681 530 aaKnown RBP3.28□□□□□ -1.88
SRL1YOR247W TAX4P47030 604 aa3.28□□□□□ -1.88
SRL1YOR247W BPL1P48445 690 aaPredicted RBP3.28□□□□□ -1.88
SRL1YOR247W HOS2P53096 452 aaPredicted RBP3.28□□□□□ -1.88
SRL1YOR247W ART5P53244 586 aaKnown RBP3.28□□□□□ -1.88
SRL1YOR247W ATP23P53722 227 aa3.28□□□□□ -1.88
SRL1YOR247W PIG1Q06216 648 aa3.28□□□□□ -1.88
SRL1YOR247W SUT2Q12286 268 aa3.28□□□□□ -1.88
SRL1YOR247W GPA1P08539 472 aa3.27□□□□□ -1.89
SRL1YOR247W OPI1P21957 404 aa3.27□□□□□ -1.89
SRL1YOR247W CLB2P24869 491 aa3.27□□□□□ -1.89
SRL1YOR247W TFB1P32776 642 aa3.27□□□□□ -1.89
SRL1YOR247W PXL1P36166 706 aa3.27□□□□□ -1.89
SRL1YOR247W SGF73P53165 657 aa3.27□□□□□ -1.89
SRL1YOR247W TOF2Q02208 771 aa3.27□□□□□ -1.89
SRL1YOR247W PDS5Q04264 1277 aa3.27□□□□□ -1.89
SRL1YOR247W ERB1Q04660 807 aaKnown RBP3.27□□□□□ -1.89
SRL1YOR247W YDL007C-AQ2V2Q0 85 aa3.27□□□□□ -1.89
SRL1YOR247W BRR1Q99177 341 aaPredicted RBP3.27□□□□□ -1.89
SRL1YOR247W PUT2P07275 575 aa3.26□□□□□ -1.89
SRL1YOR247W TUB1P09733 447 aaKnown RBP3.26□□□□□ -1.89
SRL1YOR247W RPL3P14126 387 aaKnown RBP3.26□□□□□ -1.89
SRL1YOR247W RPB8P20436 146 aa3.26□□□□□ -1.89
SRL1YOR247W CLB1P24868 471 aa3.26□□□□□ -1.89
SRL1YOR247W GAC1P28006 793 aa3.26□□□□□ -1.89
SRL1YOR247W ANS1P38832 159 aa3.26□□□□□ -1.89
SRL1YOR247W ZIM17P42844 174 aa3.26□□□□□ -1.89
SRL1YOR247W BUD27P43573 796 aaKnown RBP RIP-Chip data3.26□□□□□ -1.89not detected
SRL1YOR247W ALK1P43633 760 aaKnown RBP3.26□□□□□ -1.89
SRL1YOR247W YGR126WP53274 230 aa3.26□□□□□ -1.89
SRL1YOR247W CAF130P53280 1122 aaPredicted RBP3.26□□□□□ -1.89
SRL1YOR247W YTP1P53584 459 aa3.26□□□□□ -1.89
SRL1YOR247W RSM23Q01163 450 aa3.26□□□□□ -1.89
SRL1YOR247W KAP120Q02932 1032 aa3.26□□□□□ -1.89
SRL1YOR247W ATG26Q06321 1198 aa3.26□□□□□ -1.89
SRL1YOR247W YOL159CQ08300 171 aa3.26□□□□□ -1.89
SRL1YOR247W YLR111WQ12528 110 aa3.26□□□□□ -1.89
SRL1YOR247W AFI1Q99222 893 aa3.26□□□□□ -1.89
SRL1YOR247W YER145C-AA0A023PYF4 145 aa3.25□□□□□ -1.89
SRL1YOR247W MDH1P17505 334 aaKnown RBP RIP-Chip data3.25□□□□□ -1.89not detected
SRL1YOR247W MNE1P24720 663 aa3.25□□□□□ -1.89
SRL1YOR247W NIP100P33420 868 aa3.25□□□□□ -1.89
SRL1YOR247W YPT53P36019 220 aa3.25□□□□□ -1.89
SRL1YOR247W STV1P37296 890 aa3.25□□□□□ -1.89
SRL1YOR247W NTC20P38302 140 aaPredicted RBP3.25□□□□□ -1.89
SRL1YOR247W GDI1P39958 451 aaKnown RBP3.25□□□□□ -1.89
SRL1YOR247W SNO3P43544 222 aa3.25□□□□□ -1.89
SRL1YOR247W LYS20P48570 428 aaKnown RBP3.25□□□□□ -1.89
SRL1YOR247W BNI5P53890 448 aaKnown RBP3.25□□□□□ -1.89
SRL1YOR247W YNL144CP53907 740 aa3.25□□□□□ -1.89
SRL1YOR247W ASI1P54074 624 aa3.25□□□□□ -1.89
SRL1YOR247W RPA49Q01080 415 aaPredicted RBP3.25□□□□□ -1.89
SRL1YOR247W ARP10Q04549 284 aa3.25□□□□□ -1.89
SRL1YOR247W AIM32Q04689 311 aa3.25□□□□□ -1.89
SRL1YOR247W ROY1Q04847 553 aa3.25□□□□□ -1.89
SRL1YOR247W DON1Q05610 365 aa3.25□□□□□ -1.89
SRL1YOR247W YLR345WQ06137 509 aa3.25□□□□□ -1.89
SRL1YOR247W RTT109Q07794 436 aa3.25□□□□□ -1.89
SRL1YOR247W FRE3Q08905 711 aa3.25□□□□□ -1.89
SRL1YOR247W RPL31BP0C2H9 113 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W HOM2P13663 365 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W SRV2P17555 526 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W NUP1P20676 1076 aa3.24□□□□□ -1.89
SRL1YOR247W CPR2P23285 205 aa3.24□□□□□ -1.89
SRL1YOR247W COQ3P27680 312 aa3.24□□□□□ -1.89
SRL1YOR247W URA7P28274 579 aaKnown RBP3.24□□□□□ -1.89
SRL1YOR247W RAD14P28519 371 aa3.24□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms