RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W ACO2P39533 789 aa7.1□□□□□ -1.27
HDA1YNL021W TMN3P40071 706 aa7.1□□□□□ -1.27
HDA1YNL021W AGX1P43567 385 aa7.1□□□□□ -1.27
HDA1YNL021W FMS1P50264 508 aa7.1□□□□□ -1.27
HDA1YNL021W VPS20Q04272 221 aa7.1□□□□□ -1.27
HDA1YNL021W EST1P17214 699 aaPredicted RBP7.09□□□□□ -1.27
HDA1YNL021W YSP3P25036 478 aa7.09□□□□□ -1.27
HDA1YNL021W FEN2P25621 512 aaKnown RBP7.09□□□□□ -1.27
HDA1YNL021W CRM1P30822 1084 aaKnown RBP7.09□□□□□ -1.27
HDA1YNL021W DSS4P32601 143 aa7.09□□□□□ -1.27
HDA1YNL021W VPS17P32913 551 aa7.09□□□□□ -1.27
HDA1YNL021W TCD2P36101 447 aaKnown RBP7.09□□□□□ -1.27
HDA1YNL021W NUP60P39705 539 aa7.09□□□□□ -1.27
HDA1YNL021W YIL077CP40508 320 aa7.09□□□□□ -1.27
HDA1YNL021W MKT1P40850 830 aaKnown RBP7.09□□□□□ -1.27
HDA1YNL021W SMC3P47037 1230 aa7.09□□□□□ -1.27
HDA1YNL021W YGR054WP53235 642 aaKnown RBP7.09□□□□□ -1.27
HDA1YNL021W TWF1P53250 332 aa7.09□□□□□ -1.27
HDA1YNL021W ABZ2Q03266 374 aa7.09□□□□□ -1.27
HDA1YNL021W HER1Q12276 1246 aa7.09□□□□□ -1.27
HDA1YNL021W GAL10P04397 699 aa7.09□□□□□ -1.28
HDA1YNL021W TIF3P34167 436 aaKnown RBP7.09□□□□□ -1.28
HDA1YNL021W APT2P36973 181 aa7.09□□□□□ -1.28
HDA1YNL021W OTU2P38747 307 aaKnown RBP7.09□□□□□ -1.28
HDA1YNL021W REV7P38927 245 aa7.09□□□□□ -1.28
HDA1YNL021W BDH2P39713 417 aa7.09□□□□□ -1.28
HDA1YNL021W MET12P46151 657 aa7.09□□□□□ -1.28
HDA1YNL021W IDS2P46958 469 aa7.09□□□□□ -1.28
HDA1YNL021W NPA3P47122 385 aa7.09□□□□□ -1.28
HDA1YNL021W USA1Q03714 838 aa7.09□□□□□ -1.28
HDA1YNL021W YDR239CQ03780 787 aa7.09□□□□□ -1.28
HDA1YNL021W AI3P03877 415 aa7.08□□□□□ -1.28
HDA1YNL021W PET123P17558 318 aa7.08□□□□□ -1.28
HDA1YNL021W RML2P32611 393 aa7.08□□□□□ -1.28
HDA1YNL021W YJL206CP39529 758 aa7.08□□□□□ -1.28
HDA1YNL021W CHS6P40955 746 aa7.08□□□□□ -1.28
HDA1YNL021W SWP82P43554 623 aa7.08□□□□□ -1.28
HDA1YNL021W RFX1P48743 811 aa7.08□□□□□ -1.28
HDA1YNL021W RHO5P53879 331 aaKnown RBP7.08□□□□□ -1.28
HDA1YNL021W VTC3Q02725 835 aa7.08□□□□□ -1.28
HDA1YNL021W PLB2Q03674 706 aa7.08□□□□□ -1.28
HDA1YNL021W YMR111CQ04461 462 aaPredicted RBP7.08□□□□□ -1.28
HDA1YNL021W PEX19Q07418 342 aa7.08□□□□□ -1.28
HDA1YNL021W RLM1Q12224 676 aa7.08□□□□□ -1.28
HDA1YNL021W SWM1Q12379 170 aa7.08□□□□□ -1.28
HDA1YNL021W AVL9Q12500 764 aa7.08□□□□□ -1.28
HDA1YNL021W SEC12P11655 471 aa7.07□□□□□ -1.28
HDA1YNL021W YIH1P25637 258 aa7.07□□□□□ -1.28
HDA1YNL021W BCS1P32839 456 aa7.07□□□□□ -1.28
HDA1YNL021W HSM3P38348 480 aa7.07□□□□□ -1.28
HDA1YNL021W RPP1P38786 293 aa7.07□□□□□ -1.28
HDA1YNL021W INP52P50942 1183 aa7.07□□□□□ -1.28
HDA1YNL021W UBX2Q04228 584 aa7.07□□□□□ -1.28
HDA1YNL021W UBX3Q12229 455 aa7.07□□□□□ -1.28
HDA1YNL021W CYC1P00044 109 aaPredicted RBP7.07□□□□□ -1.28
HDA1YNL021W RFA2P26754 273 aaKnown RBP7.07□□□□□ -1.28
HDA1YNL021W ARO9P38840 513 aaPredicted RBP7.07□□□□□ -1.28
HDA1YNL021W ELO3P40319 345 aa7.07□□□□□ -1.28
HDA1YNL021W CHA4P43634 648 aa7.07□□□□□ -1.28
HDA1YNL021W APT1P49435 187 aaKnown RBP7.07□□□□□ -1.28
HDA1YNL021W CTR1P49573 406 aa7.07□□□□□ -1.28
HDA1YNL021W DCI1Q08558 271 aa7.07□□□□□ -1.28
HDA1YNL021W LAM4P38800 1345 aa7.07□□□□□ -1.28
HDA1YNL021W YBR085C-AO43137 85 aa7.06□□□□□ -1.28
HDA1YNL021W VPS34P22543 875 aa7.06□□□□□ -1.28
HDA1YNL021W PHO91P27514 894 aa7.06□□□□□ -1.28
HDA1YNL021W KRE2P27809 442 aa7.06□□□□□ -1.28
HDA1YNL021W AFG1P32317 509 aa7.06□□□□□ -1.28
HDA1YNL021W PDB1P32473 366 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W SSE1P32589 693 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W SLM4P38247 162 aa7.06□□□□□ -1.28
HDA1YNL021W YMR147WP40218 223 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W JJJ3P47138 172 aa7.06□□□□□ -1.28
HDA1YNL021W STR3P53101 465 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W RPT4P53549 437 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W SSY1Q03770 852 aa7.06□□□□□ -1.28
HDA1YNL021W INM2Q05533 292 aa7.06□□□□□ -1.28
HDA1YNL021W PMD1P32634 1753 aa7.06□□□□□ -1.28
HDA1YNL021W KGD1P20967 1014 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W SPL2P38839 148 aa7.06□□□□□ -1.28
HDA1YNL021W BAP3P41815 604 aa7.06□□□□□ -1.28
HDA1YNL021W HXT14P42833 540 aa7.06□□□□□ -1.28
HDA1YNL021W IRC8P47046 822 aa7.06□□□□□ -1.28
HDA1YNL021W ECM27P47144 725 aa7.06□□□□□ -1.28
HDA1YNL021W IMD4P50094 524 aaKnown RBP7.06□□□□□ -1.28
HDA1YNL021W FHN1P53279 174 aa7.06□□□□□ -1.28
HDA1YNL021W YGR266WP53326 701 aa7.06□□□□□ -1.28
HDA1YNL021W RPL3P14126 387 aaKnown RBP7.05□□□□□ -1.28
HDA1YNL021W YME1P32795 747 aa7.05□□□□□ -1.28
HDA1YNL021W YME2P32843 850 aa7.05□□□□□ -1.28
HDA1YNL021W SRB2P34162 210 aa7.05□□□□□ -1.28
HDA1YNL021W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.05□□□□□ -1.28not detected
HDA1YNL021W MRPL40P36534 297 aa7.05□□□□□ -1.28
HDA1YNL021W PIM1P36775 1133 aa7.05□□□□□ -1.28
HDA1YNL021W HYR1P40581 163 aaKnown RBP7.05□□□□□ -1.28
HDA1YNL021W EFM3P47163 339 aa7.05□□□□□ -1.28
HDA1YNL021W CUE3P53137 624 aaKnown RBP7.05□□□□□ -1.28
HDA1YNL021W LPX1Q12405 387 aaKnown RBP7.05□□□□□ -1.28
HDA1YNL021W CDC6P09119 513 aa7.04□□□□□ -1.28
HDA1YNL021W FMO1P38866 432 aa7.04□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 10.6 ms