RNA–Protein interactions for RNA: YMR287C

DSS1, Transcript of 3'-5' exoribonuclease, yeast

Gene DSS1, Length 2,910 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DSS1	YMR287C	PFA4	Q12006	378 aa		3.9	□□□□□ -1.79
DSS1	YMR287C	YDL007C-A	Q2V2Q0	85 aa		3.9	□□□□□ -1.79
DSS1	YMR287C	SUC2	P00724	532 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	CDC15	P27636	974 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	YIL060W	P40519	144 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	RPL15B	P54780	204 aa	Predicted RBP	3.89	□□□□□ -1.79
DSS1	YMR287C	RSC9	Q03124	581 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	SNU56	Q03782	492 aa	Known RBP	3.89	□□□□□ -1.79
DSS1	YMR287C	SEC39	Q12745	709 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	SGS1	P35187	1447 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	MF(ALPHA)1	P01149	165 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	YMR085W	P0CF18	432 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	NAT1	P12945	854 aa	Known RBP	3.89	□□□□□ -1.79
DSS1	YMR287C	FUR1	P18562	216 aa	Known RBP	3.89	□□□□□ -1.79
DSS1	YMR287C	YKL100C	P34248	587 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	LHS1	P36016	881 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	UBP11	P36026	717 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	MAF1	P41910	395 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	NNF2	P53253	936 aa		3.89	□□□□□ -1.79
DSS1	YMR287C	ERB1	Q04660	807 aa	Known RBP	3.89	□□□□□ -1.79
DSS1	YMR287C	SEC63	P14906	663 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	ART10	P18634	518 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	PRE8	P23639	250 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	IMG1	P25626	169 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	AGP2	P38090	596 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	ERG26	P53199	349 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	APL5	Q08951	932 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	TPM1	P17536	199 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	GAC1	P28006	793 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	PIM1	P36775	1133 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	FAR3	P46671	204 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	TEN1	Q07921	160 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	LEU9	Q12166	604 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	RAP1	P11938	827 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	PDA1	P16387	420 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	VMA16	P23968	213 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	YCR006C	P25350	157 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	IDH2	P28241	369 aa	Known RBP	3.88	□□□□□ -1.79
DSS1	YMR287C	RFC3	P38629	340 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	SMC3	P47037	1230 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	MCH4	Q08268	501 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	SFI1	Q12369	946 aa		3.88	□□□□□ -1.79
DSS1	YMR287C	CDC43	P18898	376 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	PEP3	P27801	918 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	RML2	P32611	393 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	PHO90	P39535	881 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	YJL068C	P40363	299 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	YJL043W	P47053	257 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	YJR154W	P47181	346 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	ORC5	P50874	479 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	DIA3	P52290	468 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	YNL058C	P53947	316 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	APM1	Q00776	475 aa	Predicted RBP	3.87	□□□□□ -1.79
DSS1	YMR287C	NUP100	Q02629	959 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	DPB4	Q04603	196 aa	Known RBP	3.87	□□□□□ -1.79
DSS1	YMR287C	PRP2	P20095	876 aa	Predicted RBP	3.87	□□□□□ -1.79
DSS1	YMR287C	CDC60	P26637	1090 aa	Known RBP	3.87	□□□□□ -1.79
DSS1	YMR287C	PXA2	P34230	853 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	REG2	P38232	338 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	IRC8	P47046	822 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	RPT6	Q01939	405 aa	Known RBP	3.87	□□□□□ -1.79
DSS1	YMR287C	ROY1	Q04847	553 aa		3.87	□□□□□ -1.79
DSS1	YMR287C	ILV2	P07342	687 aa	Known RBP	3.86	□□□□□ -1.79
DSS1	YMR287C	MRP2	P10663	115 aa	Predicted RBP	3.86	□□□□□ -1.79
DSS1	YMR287C	APD1	P38281	316 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	APE4	P38821	490 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	YHR210C	P38893	341 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	DOT5	P40553	215 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	IRC7	P43623	340 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	BUD22	Q04347	519 aa	Known RBP	3.86	□□□□□ -1.79
DSS1	YMR287C	RAD52	P06778	471 aa	Known RBP	3.86	□□□□□ -1.79
DSS1	YMR287C	YCP4	P25349	247 aa	Known RBP	3.86	□□□□□ -1.79
DSS1	YMR287C	SEF1	P34228	1148 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	STB6	P36085	766 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	YER130C	P39959	443 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	GAT1	P43574	510 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	VID30	P53076	958 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	MDM30	Q05930	598 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	RIM20	Q12033	661 aa		3.86	□□□□□ -1.79
DSS1	YMR287C	NIP1	P32497	812 aa	Known RBP	3.85	□□□□□ -1.79
DSS1	YMR287C	MSR1	P38714	643 aa		3.85	□□□□□ -1.79
DSS1	YMR287C	IPI3	P53877	555 aa		3.85	□□□□□ -1.79
DSS1	YMR287C	SPC34	P36131	295 aa		3.85	□□□□□ -1.79
DSS1	YMR287C	TPO3	Q06451	622 aa		3.85	□□□□□ -1.79
DSS1	YMR287C	CLB1	P24868	471 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	TCM62	P38228	572 aa	Known RBP	3.84	□□□□□ -1.79
DSS1	YMR287C	ALG5	P40350	334 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	HXT14	P42833	540 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	ATG27	P46989	271 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	TOM22	P49334	152 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	FMP30	Q02883	468 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	PDR8	Q06149	701 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	ILV6	P25605	309 aa	Known RBP	3.84	□□□□□ -1.79
DSS1	YMR287C	YCR051W	P25631	222 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	EFM2	P38347	419 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	TIF4631	P39935	952 aa	Known RBP	3.84	□□□□□ -1.79
DSS1	YMR287C	DLD2	P46681	530 aa	Known RBP	3.84	□□□□□ -1.79
DSS1	YMR287C	HEF3	P53978	1044 aa	Known RBP	3.84	□□□□□ -1.79
DSS1	YMR287C	UAF30	Q08747	228 aa		3.84	□□□□□ -1.79
DSS1	YMR287C	MBB1	P39534	108 aa		3.84	□□□□□ -1.8

Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms