RNA–Protein interactions for RNA: YMR240C

CUS1, Transcript of Protein required for assembly of U2 snRNP into the spliceosome, yeastyeast

Gene CUS1, Length 1,311 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUS1YMR240C LSM5P40089 93 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C ATF1P40353 525 aa4.72□□□□□ -1.65
CUS1YMR240C PET130P47065 347 aa4.72□□□□□ -1.65
CUS1YMR240C IMD4P50094 524 aaKnown RBP4.72□□□□□ -1.65
CUS1YMR240C CAC2Q04199 468 aa4.72□□□□□ -1.65
CUS1YMR240C ATG26Q06321 1198 aa4.72□□□□□ -1.65
CUS1YMR240C RLM1Q12224 676 aa4.72□□□□□ -1.65
CUS1YMR240C CRC1Q12289 327 aa4.72□□□□□ -1.65
CUS1YMR240C TAD3Q9URQ3 322 aa4.72□□□□□ -1.65
CUS1YMR240C GPI10P30777 616 aa4.71□□□□□ -1.66
CUS1YMR240C BYE1P36106 594 aa4.71□□□□□ -1.66
CUS1YMR240C ANS1P38832 159 aa4.71□□□□□ -1.66
CUS1YMR240C ULP2P40537 1034 aaPredicted RBP4.71□□□□□ -1.66
CUS1YMR240C DOT5P40553 215 aa4.71□□□□□ -1.66
CUS1YMR240C TWF1P53250 332 aa4.71□□□□□ -1.66
CUS1YMR240C IPI3P53877 555 aa4.71□□□□□ -1.66
CUS1YMR240C YDR239CQ03780 787 aa4.71□□□□□ -1.66
CUS1YMR240C RPC11Q04307 110 aaPredicted RBP4.71□□□□□ -1.66
CUS1YMR240C ARP10Q04549 284 aa4.71□□□□□ -1.66
CUS1YMR240C ADE13Q05911 482 aaKnown RBP4.71□□□□□ -1.66
CUS1YMR240C THI7Q05998 598 aa4.71□□□□□ -1.66
CUS1YMR240C MRD1Q06106 887 aaKnown RBP4.71□□□□□ -1.66
CUS1YMR240C ECM30Q06673 1274 aa4.71□□□□□ -1.66
CUS1YMR240C RPS10AQ08745 105 aaPredicted RBP4.71□□□□□ -1.66
CUS1YMR240C ATG29Q12092 213 aa4.71□□□□□ -1.66
CUS1YMR240C SEC39Q12745 709 aa4.71□□□□□ -1.66
CUS1YMR240C SGS1P35187 1447 aa4.7□□□□□ -1.66
CUS1YMR240C PUT2P07275 575 aa4.7□□□□□ -1.66
CUS1YMR240C YKL100CP34248 587 aa4.7□□□□□ -1.66
CUS1YMR240C RFC1P38630 861 aaKnown RBP4.7□□□□□ -1.66
CUS1YMR240C LTP1P40347 161 aa4.7□□□□□ -1.66
CUS1YMR240C YNL144CP53907 740 aa4.7□□□□□ -1.66
CUS1YMR240C MSC1Q03104 513 aa4.7□□□□□ -1.66
CUS1YMR240C RIM13Q03792 727 aa4.7□□□□□ -1.66
CUS1YMR240C YMR155WQ03795 547 aa4.7□□□□□ -1.66
CUS1YMR240C RQC1Q05468 723 aaKnown RBP4.7□□□□□ -1.66
CUS1YMR240C ECM22Q05958 814 aaPredicted RBP4.7□□□□□ -1.66
CUS1YMR240C MTR2P34232 184 aaKnown RBP4.69□□□□□ -1.66
CUS1YMR240C RPL32P38061 130 aaKnown RBP4.69□□□□□ -1.66
CUS1YMR240C UBA4P38820 440 aa4.69□□□□□ -1.66
CUS1YMR240C CIN4P39110 191 aa4.69□□□□□ -1.66
CUS1YMR240C AXL1P40851 1208 aa4.69□□□□□ -1.66
CUS1YMR240C RPS10BP46784 105 aaKnown RBP4.69□□□□□ -1.66
CUS1YMR240C YGR250CP53316 781 aaKnown RBP4.69□□□□□ -1.66
CUS1YMR240C RSM23Q01163 450 aa4.69□□□□□ -1.66
CUS1YMR240C MCP2Q06567 569 aa4.69□□□□□ -1.66
CUS1YMR240C POS5Q06892 414 aa4.69□□□□□ -1.66
CUS1YMR240C CDC45Q08032 650 aa4.69□□□□□ -1.66
CUS1YMR240C PDX1P16451 410 aa4.68□□□□□ -1.66
CUS1YMR240C YAP1P19880 650 aaKnown RBP4.68□□□□□ -1.66
CUS1YMR240C SEC66P33754 206 aa4.68□□□□□ -1.66
CUS1YMR240C CMC1P36064 111 aa4.68□□□□□ -1.66
CUS1YMR240C MSR1P38714 643 aa4.68□□□□□ -1.66
CUS1YMR240C YIL024CP40543 189 aa4.68□□□□□ -1.66
CUS1YMR240C HXT9P40885 567 aa4.68□□□□□ -1.66
CUS1YMR240C PSA1P41940 361 aaKnown RBP4.68□□□□□ -1.66
CUS1YMR240C PYK2P52489 506 aaKnown RBP4.68□□□□□ -1.66
CUS1YMR240C RPB8P20436 146 aa4.67□□□□□ -1.66
CUS1YMR240C CLB3P24870 427 aa4.67□□□□□ -1.66
CUS1YMR240C RPC53P25441 422 aa4.67□□□□□ -1.66
CUS1YMR240C LEU5P38702 357 aa4.67□□□□□ -1.66
CUS1YMR240C OTU2P38747 307 aaKnown RBP4.67□□□□□ -1.66
CUS1YMR240C PHO90P39535 881 aa4.67□□□□□ -1.66
CUS1YMR240C YIL060WP40519 144 aa4.67□□□□□ -1.66
CUS1YMR240C GPD2P41911 440 aaKnown RBP4.67□□□□□ -1.66
CUS1YMR240C VPS25P47142 202 aa4.67□□□□□ -1.66
CUS1YMR240C YPT11P48559 417 aa4.67□□□□□ -1.66
CUS1YMR240C SGF73P53165 657 aa4.67□□□□□ -1.66
CUS1YMR240C SNF3P10870 884 aa4.66□□□□□ -1.66
CUS1YMR240C SUI2P20459 304 aaKnown RBP4.66□□□□□ -1.66
CUS1YMR240C YME1P32795 747 aa4.66□□□□□ -1.66
CUS1YMR240C PMT1P33775 817 aa4.66□□□□□ -1.66
CUS1YMR240C STV1P37296 890 aa4.66□□□□□ -1.66
CUS1YMR240C HXT14P42833 540 aa4.66□□□□□ -1.66
CUS1YMR240C STB2P46679 850 aa4.66□□□□□ -1.66
CUS1YMR240C CTL1Q03220 320 aaKnown RBP4.66□□□□□ -1.66
CUS1YMR240C YDL007C-AQ2V2Q0 85 aa4.66□□□□□ -1.66
CUS1YMR240C YOL159C-AQ3E769 90 aa4.66□□□□□ -1.66
CUS1YMR240C YER190C-BP0CX94 160 aa4.65□□□□□ -1.67
CUS1YMR240C YEL077W-AP0CX95 160 aa4.65□□□□□ -1.67
CUS1YMR240C YGR296C-BP0CX96 160 aa4.65□□□□□ -1.67
CUS1YMR240C YPL283W-BP0CX97 160 aa4.65□□□□□ -1.67
CUS1YMR240C YPR204C-AP0CX98 160 aa4.65□□□□□ -1.67
CUS1YMR240C ELO2P25358 347 aa4.65□□□□□ -1.67
CUS1YMR240C XBP1P40489 647 aa4.65□□□□□ -1.67
CUS1YMR240C BNA3P47039 444 aaKnown RBP4.65□□□□□ -1.67
CUS1YMR240C YGR126WP53274 230 aa4.65□□□□□ -1.67
CUS1YMR240C LGE1Q02796 332 aaKnown RBP4.65□□□□□ -1.67
CUS1YMR240C YDR131CQ03899 556 aa4.65□□□□□ -1.67
CUS1YMR240C COQ9Q05779 260 aa4.65□□□□□ -1.67
CUS1YMR240C YDL218WQ07629 317 aa4.65□□□□□ -1.67
CUS1YMR240C ATX2Q12067 313 aa4.65□□□□□ -1.67
CUS1YMR240C PMS1P14242 873 aa4.64□□□□□ -1.67
CUS1YMR240C VRG4P40107 337 aa4.64□□□□□ -1.67
CUS1YMR240C ALK1P43633 760 aaKnown RBP4.64□□□□□ -1.67
CUS1YMR240C TOF2Q02208 771 aa4.64□□□□□ -1.67
CUS1YMR240C ECI1Q05871 280 aa4.64□□□□□ -1.67
CUS1YMR240C YLR112WQ12130 139 aa4.64□□□□□ -1.67
CUS1YMR240C NCE102Q12207 173 aaRIP-Chip data4.64□□□□□ -1.67not detected
CUS1YMR240C PUF2Q12221 1075 aaKnown RBP RIP-Chip data4.64□□□□□ -1.67not detected
Retrieved 100 of 5,963 RNA–protein pairs in 96.4 ms